RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 FAM89AQ96GI7 184 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 ITSN1Q15811 1721 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 H7C0C1 242 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 ATP5OP48047 213 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 HP1BP3Q5SSJ5 553 aaPredicted RBP14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 C8orf58Q8NAV2 365 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 GSDMAQ96QA5 445 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 ZMYM6O95789 1325 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 ABCC12Q96J65 1359 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 ACTN1P12814 892 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 TRIM55Q9BYV6 548 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 JAG2Q9Y219 1238 aa14.27□□□□□ -0.12
SYNGAP1-208ENST00000629380 PZPP20742 1482 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 CFBP00751 764 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 HSPA6P17066 643 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 TNNI3KQ59H18 835 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 NDUFAF2Q8N183 169 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 FPGT-TNNI3KV9GXZ4 949 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 POLR2MP0CAP2 368 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 MCF2P10911 925 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 ARL13BQ3SXY8 428 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 TAC1P20366 129 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 LRRC23Q53EV4 343 aaPredicted RBP14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 TTLL7Q6ZT98 887 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 RYBPQ8N488 228 aaPredicted RBP14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 PSTPIP2Q9H939 334 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 FAM135BQ49AJ0 1406 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 RPAINQ86UA6 219 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 TRAIPQ9BWF2 469 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 SLC38A10Q9HBR0 1119 aa14.27□□□□□ -0.13
SYNGAP1-208ENST00000629380 SERPINI2O75830 405 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 DLATP10515 647 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 ABI1Q8IZP0 508 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 RETREG2Q8NC44 543 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 OR9Q1Q8NGQ5 310 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 OCM2P0CE71 109 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 OCMP0CE72 109 aaPredicted RBP14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 TMED1Q13445 227 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 PIP4K2CQ8TBX8 421 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 ITM2BQ9Y287 266 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 MAGI3Q5TCQ9 1506 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 CCDC151A5D8V7 595 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 PCP11498 1178 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 CIITAP33076 1130 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 ATP1A2P50993 1020 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 BANK1Q8NDB2 785 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 PCDHB4Q9Y5E5 795 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 SYNMO15061 1565 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 GAP43P17677 238 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 C1orf228Q6PIY5 440 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 NOSTRINQ8IVI9 506 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 TRIM33Q9UPN9 1127 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 TET3O43151 1660 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 SRGAP2CP0DJJ0 459 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 MFAP3P55082 362 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 CC2D2BQ6DHV5 1058 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 STX19Q8N4C7 294 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 SERPINB2P05120 415 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 SERPINB10P48595 397 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 PA2G4Q9UQ80 394 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 GTPBP10A4D1E9 387 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 PYGBP11216 843 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 UNC5CLQ8IV45 518 aa14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 DIS3L2Q8IYB7 885 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-208ENST00000629380 ERVK-7P63135 1459 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 FBXW4P57775 412 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 IGBP1P78318 339 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 GRIN1Q05586 938 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 ARAP3Q8WWN8 1544 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 IFRD2Q12894 506 aaPredicted RBP14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 KHDRBS2Q5VWX1 349 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 ARMT1Q9H993 441 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 MLXIPQ9HAP2 919 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 MAP2P11137 1827 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 MSH2P43246 934 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 SPOPLQ6IQ16 392 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 CALR3Q96L12 384 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 FRA10AC1Q70Z53 315 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 POLE3Q9NRF9 147 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 PCYT1AP49585 367 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 PTK2Q05397 1052 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 GCKRQ14397 625 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 PDE4DIPQ5VU43 2346 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 PNOCQ13519 176 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 KRT33BQ14525 404 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 FAM47CQ5HY64 1035 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 ANGPTL8Q6UXH0 198 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 RFX6Q8HWS3 928 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 RNF169Q8NCN4 708 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 FBLN1P23142 703 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 LRMPQ12912 555 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 THOC5Q13769 683 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 C6orf118Q5T5N4 469 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 PATL1Q86TB9 770 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 MYLK4Q86YV6 388 aaPredicted RBP14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 EDEM3Q9BZQ6 932 aa14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.25□□□□□ -0.13
SYNGAP1-208ENST00000629380 TLK1Q9UKI8 766 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms