RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 RLBP1P12271 317 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 EZRP15311 586 aaKnown RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 NOP2P46087 812 aaKnown RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 GJA9P57773 515 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 ARHGAP4P98171 946 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 FOXO4P98177 505 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 CAP1Q01518 475 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 TRAF1Q13077 416 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 PPP2R5AQ15172 486 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 PTPN14Q15678 1187 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 NBPF8Q3BBV2 869 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 BBS9Q3SYG4 887 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC184Q52MB2 194 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 HSP90AB4PQ58FF6 505 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 TMED8Q6PL24 325 aaPredicted RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 FAM43BQ6ZT52 329 aaPredicted RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 MICALCLQ6ZW33 695 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 LUZP1Q86V48 1076 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 GAS2L3Q86XJ1 694 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 ZNF761Q86XN6 746 aaPredicted RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 RPUSD2Q8IZ73 545 aaKnown RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 CARFQ8N187 725 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 USHBP1Q8N6Y0 703 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 RETREG2Q8NC44 543 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 CHST13Q8NET6 341 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 FBXO18Q8NFZ0 1043 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 UBXN4Q92575 508 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 EXOC4Q96A65 974 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 SYTL4Q96C24 671 aaPredicted RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC97Q96F63 343 aaPredicted RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC34Q96HJ3 373 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 NOX5Q96PH1 765 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 SRRTQ9BXP5 876 aaKnown RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 GBP3Q9H0R5 595 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 TUT1Q9H6E5 874 aaKnown RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 BCAS3Q9H6U6 928 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 INCENPQ9NQS7 918 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 SLC52A1Q9NWF4 448 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 MINPP1Q9UNW1 487 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 SH3BP1Q9Y3L3 701 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 TSC22D4Q9Y3Q8 395 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 PCDHB5Q9Y5E4 795 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 PCSK5Q92824 1860 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 ELP1O95163 1332 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 POLA1P09884 1462 aaPredicted RBP2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 ABCA5Q8WWZ7 1642 aa2.39□□□□□ -2.03
SPTAN1-216ENST00000629047 CFAP65Q6ZU64 1925 aaKnown RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 ROCK1Q13464 1354 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 ANKRD36BQ8N2N9 1353 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 A0A087WUV0 522 aaPredicted RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 GOLGA6L7A0A1B0GV03 622 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 SHTN1A0MZ66 631 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 SYCE3A1L190 88 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 SH3D21A4FU49 640 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 KLHL33A6NCF5 533 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 A6NNZ2 444 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 GFRA2O00451 464 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 ABLIM1O14639 778 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 U2SURPO15042 1029 aaKnown RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 POLR3GO15318 223 aaPredicted RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 ERLIN2O94905 339 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 ADCY5O95622 1261 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 CAVIN2O95810 425 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 TUBBP07437 444 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC192P0DO97 292 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 XRCC5P13010 732 aaKnown RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 PRKCAP17252 672 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 CAPN2P17655 700 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 MCM3P25205 808 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 ACTN2P35609 894 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 IL12RB1P42701 662 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 SERPINB4P48594 390 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 LMAN1P49257 510 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 NAP1L1P55209 391 aaKnown RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 RWDD2BP57060 319 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 RTP1P59025 263 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 NCBP1Q09161 790 aaKnown RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 FHL2Q14192 279 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 SMN1Q16637 294 aaKnown RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 TUBB8Q3ZCM7 444 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 DNAJC21Q5F1R6 531 aaKnown RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC183Q5T5S1 534 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 SYT10Q6XYQ8 523 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 SRLQ86TD4 932 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 SPATS2Q86XZ4 545 aaKnown RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 WDR63Q8IWG1 891 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 TEX11Q8IYF3 940 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 ZNF513Q8N8E2 541 aaPredicted RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 CEP112Q8N8E3 955 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 STAG1Q8WVM7 1258 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 ZBTB9Q96C00 473 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 CHMP4CQ96CF2 233 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 RMDN2Q96LZ7 410 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 HDAC8Q9BY41 377 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 TRIM6Q9C030 488 aaPredicted RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 TMX1Q9H3N1 280 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 VEZTQ9HBM0 779 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 CHCHD3Q9NX63 227 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms