RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 SEC24BO95487 1268 aa23.77■■□□□ 1.4
CIRBP-246ENST00000628979 PDIA3P30101 505 aaKnown RBP23.77■■□□□ 1.4
CIRBP-246ENST00000628979 CPT1AP50416 773 aa23.77■■□□□ 1.4
CIRBP-246ENST00000628979 UBE2SQ16763 222 aa23.77■■□□□ 1.4
CIRBP-246ENST00000628979 CCDC62Q6P9F0 684 aa23.77■■□□□ 1.4
CIRBP-246ENST00000628979 VSIG10LQ86VR7 867 aa23.77■■□□□ 1.4
CIRBP-246ENST00000628979 EIF5BO60841 1220 aaKnown RBP23.76■■□□□ 1.39
CIRBP-246ENST00000628979 MAGEA10P43363 369 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-246ENST00000628979 MDM2Q00987 491 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-246ENST00000628979 BRDTQ58F21 947 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-246ENST00000628979 NCOA5Q9HCD5 579 aaKnown RBP23.76■■□□□ 1.39
CIRBP-246ENST00000628979 RTEL1Q9NZ71 1219 aa23.76■■□□□ 1.39
CIRBP-246ENST00000628979 RBM27Q9P2N5 1060 aaKnown RBP23.76■■□□□ 1.39
CIRBP-246ENST00000628979 PIK3CDO00329 1044 aa23.75■■□□□ 1.39
CIRBP-246ENST00000628979 SORBS3O60504 671 aa23.75■■□□□ 1.39
CIRBP-246ENST00000628979 CABYRO75952 493 aa23.75■■□□□ 1.39
CIRBP-246ENST00000628979 GH1P01241 217 aa23.75■■□□□ 1.39
CIRBP-246ENST00000628979 PSMC6P62333 389 aa23.75■■□□□ 1.39
CIRBP-246ENST00000628979 STK3Q13188 491 aa23.75■■□□□ 1.39
CIRBP-246ENST00000628979 SH3RF1Q7Z6J0 888 aa23.75■■□□□ 1.39
CIRBP-246ENST00000628979 PHKBQ93100 1093 aa23.75■■□□□ 1.39
CIRBP-246ENST00000628979 POLR3EQ9NVU0 708 aa23.75■■□□□ 1.39
CIRBP-246ENST00000628979 DDX41Q9UJV9 622 aaKnown RBP23.75■■□□□ 1.39
CIRBP-246ENST00000628979 DCDC2CA8MYV0 355 aa23.74■■□□□ 1.39
CIRBP-246ENST00000628979 STXBP3O00186 592 aa23.74■■□□□ 1.39
CIRBP-246ENST00000628979 ARVCFO00192 962 aa23.74■■□□□ 1.39
CIRBP-246ENST00000628979 RGS20O76081 388 aa23.74■■□□□ 1.39
CIRBP-246ENST00000628979 CLTBP09497 229 aa23.74■■□□□ 1.39
CIRBP-246ENST00000628979 AKAP17AQ02040 695 aaKnown RBP23.74■■□□□ 1.39
CIRBP-246ENST00000628979 HABP4Q5JVS0 413 aaKnown RBP23.74■■□□□ 1.39
CIRBP-246ENST00000628979 TYW1BQ6NUM6 668 aa23.74■■□□□ 1.39
CIRBP-246ENST00000628979 LBHD1Q9BQE6 289 aaPredicted RBP23.74■■□□□ 1.39
CIRBP-246ENST00000628979 PDLIM7Q9NR12 457 aa23.74■■□□□ 1.39
CIRBP-246ENST00000628979 MYH7BA7E2Y1 1941 aa23.73■■□□□ 1.39
CIRBP-246ENST00000628979 EVCP57679 992 aa23.73■■□□□ 1.39
CIRBP-246ENST00000628979 ANAPC15P60006 121 aa23.73■■□□□ 1.39
CIRBP-246ENST00000628979 ARHGAP1Q07960 439 aa23.73■■□□□ 1.39
CIRBP-246ENST00000628979 ITGA7Q13683 1181 aa23.73■■□□□ 1.39
CIRBP-246ENST00000628979 AFG1LQ8WV93 481 aa23.73■■□□□ 1.39
CIRBP-246ENST00000628979 SLC26A6Q9BXS9 759 aa23.73■■□□□ 1.39
CIRBP-246ENST00000628979 TMEM39AQ9NV64 488 aa23.73■■□□□ 1.39
CIRBP-246ENST00000628979 TRIM43BA6NCK2 446 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 SMCO2A6NFE2 343 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 SPDYE3A6NKU9 549 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 CDK7P50613 346 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 ADCY7P51828 1080 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 CHMP4BP1P59074 171 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 MRPS9P82933 396 aaKnown RBP23.72■■□□□ 1.39
CIRBP-246ENST00000628979 PFKFB3Q16875 520 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-246ENST00000628979 DHX37Q8IY37 1157 aaKnown RBP23.72■■□□□ 1.39
CIRBP-246ENST00000628979 TRIM43Q96BQ3 446 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-246ENST00000628979 GDF15Q99988 308 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 BARHL2Q9NY43 387 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 PCDHA6Q9UN73 950 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 PCDHA8Q9Y5H6 950 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 FRMPD4Q14CM0 1322 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 NID2Q14112 1375 aa23.72■■□□□ 1.39
CIRBP-246ENST00000628979 MROH7Q68CQ1 1323 aa23.71■■□□□ 1.39
CIRBP-246ENST00000628979 A6NJR5 290 aa23.71■■□□□ 1.39
CIRBP-246ENST00000628979 hCG_1984214I3L0E3 225 aa23.71■■□□□ 1.39
CIRBP-246ENST00000628979 PRPF3O43395 683 aaKnown RBP23.71■■□□□ 1.39
CIRBP-246ENST00000628979 SCG2P13521 617 aa23.71■■□□□ 1.39
CIRBP-246ENST00000628979 PURAQ00577 322 aaKnown RBP23.71■■□□□ 1.39
CIRBP-246ENST00000628979 FAAP100Q0VG06 881 aa23.71■■□□□ 1.39
CIRBP-246ENST00000628979 PPP1R18Q6NYC8 613 aa23.71■■□□□ 1.39
CIRBP-246ENST00000628979 KCNV1Q6PIU1 500 aa23.71■■□□□ 1.39
CIRBP-246ENST00000628979 ANKRD33Q7Z3H0 272 aa23.71■■□□□ 1.39
CIRBP-246ENST00000628979 ZNF713Q8N859 430 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-246ENST00000628979 ZNF274Q96GC6 653 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-246ENST00000628979 TOX2Q96NM4 488 aa23.71■■□□□ 1.39
CIRBP-246ENST00000628979 MTG1Q9BT17 334 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-246ENST00000628979 UBE2OQ9C0C9 1292 aaKnown RBP23.71■■□□□ 1.39
CIRBP-246ENST00000628979 RIC8AQ9NPQ8 531 aa23.71■■□□□ 1.39
CIRBP-246ENST00000628979 GRIN2DO15399 1336 aa23.7■■□□□ 1.38
CIRBP-246ENST00000628979 TLR3O15455 904 aaKnown RBP23.7■■□□□ 1.38
CIRBP-246ENST00000628979 NTRK3Q16288 839 aa23.7■■□□□ 1.38
CIRBP-246ENST00000628979 GNPTABQ3T906 1256 aa23.7■■□□□ 1.38
CIRBP-246ENST00000628979 PCNX4Q63HM2 1172 aa23.7■■□□□ 1.38
CIRBP-246ENST00000628979 PPP1R13LQ8WUF5 828 aa23.7■■□□□ 1.38
CIRBP-246ENST00000628979 PGBD1Q96JS3 809 aa23.7■■□□□ 1.38
CIRBP-246ENST00000628979 CPLX1O14810 134 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 KPNA6O60684 536 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 STAM2O75886 525 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 GGPS1O95749 300 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 MMP3P08254 477 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 SP2Q02086 613 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 LAMC2Q13753 1193 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 PKN1Q16512 942 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 BADQ92934 168 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 PRO3102Q9H379 93 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 EHMT1Q9H9B1 1298 aa23.69■■□□□ 1.38
CIRBP-246ENST00000628979 RAG1P15918 1043 aa23.68■■□□□ 1.38
CIRBP-246ENST00000628979 IFNAR1P17181 557 aa23.68■■□□□ 1.38
CIRBP-246ENST00000628979 UBA1P22314 1058 aaKnown RBP23.68■■□□□ 1.38
CIRBP-246ENST00000628979 SSRP1Q08945 709 aaKnown RBP23.68■■□□□ 1.38
CIRBP-246ENST00000628979 C8orf34Q49A92 452 aa23.68■■□□□ 1.38
CIRBP-246ENST00000628979 FAM47CQ5HY64 1035 aa23.68■■□□□ 1.38
CIRBP-246ENST00000628979 CELF3Q5SZQ8 465 aaKnown RBP23.68■■□□□ 1.38
CIRBP-246ENST00000628979 SLC43A3Q8NBI5 491 aa23.68■■□□□ 1.38
CIRBP-246ENST00000628979 MLXIPQ9HAP2 919 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms