RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 GTF3C6Q969F1 213 aa15.59■□□□□ 0.09
SOX2-OT-246ENST00000628343 VPS54Q9P1Q0 977 aa15.59■□□□□ 0.09
SOX2-OT-246ENST00000628343 PHF24Q9UPV7 400 aa15.59■□□□□ 0.09
SOX2-OT-246ENST00000628343 MCM3APO60318 1980 aa15.58■□□□□ 0.09
SOX2-OT-246ENST00000628343 ESYT2A0FGR8 921 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 DYNC1LI2O43237 492 aaPredicted RBP15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 TXNP10599 105 aaKnown RBP15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 CLK2P49760 499 aaKnown RBP15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 BEX3Q00994 111 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 TTLL4Q14679 1199 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 KCNA10Q16322 511 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 LY6KQ17RY6 165 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 TEX2Q8IWB9 1127 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 COPS5Q92905 334 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 PGBD1Q96JS3 809 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 AIFM3Q96NN9 605 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 HTATIP2Q9BUP3 242 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 SENP6Q9GZR1 1112 aaPredicted RBP15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 ZMYND12Q9H0C1 365 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 SPC25Q9HBM1 224 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 TMEM260Q9NX78 707 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 PCDHA6Q9UN73 950 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 Q9Y3F1 56 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 PCDHA8Q9Y5H6 950 aa15.58■□□□□ 0.08
SOX2-OT-246ENST00000628343 SPDYE3A6NKU9 549 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 TNRC18O15417 2968 aaPredicted RBP15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 CDKL5O76039 1030 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 DEXIO95424 95 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 RABEP1Q15276 862 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 FSCN1Q16658 493 aaKnown RBP15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 LRRC26Q2I0M4 334 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 PCNX4Q63HM2 1172 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 CCDC12Q8WUD4 166 aaPredicted RBP15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 FERMT2Q96AC1 680 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 INPP4AQ96PE3 977 aaPredicted RBP15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 TSEN34Q9BSV6 310 aaKnown RBP15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 AP5M1Q9H0R1 490 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 LIMCH1Q9UPQ0 1083 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 MRVI1Q9Y6F6 885 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 STK36Q9NRP7 1315 aa15.57■□□□□ 0.08
SOX2-OT-246ENST00000628343 A0A1W2PQ45 241 aaPredicted RBP15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 A0A1W2PQY0 241 aa15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 NKRFO15226 690 aaKnown RBP eCLIP15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 ASGR1P07306 291 aa15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 ACLYP53396 1101 aa15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 ATN1P54259 1190 aaPredicted RBP15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 GNASQ5JWF2 1037 aa15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 NSUN7Q8NE18 718 aaKnown RBP15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 OR6J1Q8NGC5 347 aa15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 ANO3Q9BYT9 981 aa15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 GLT8D2Q9H1C3 349 aa15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 C6orf50Q9HD87 102 aa15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 SH3GLB2Q9NR46 395 aa15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 RTEL1Q9NZ71 1219 aa15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 DDX41Q9UJV9 622 aaKnown RBP15.56■□□□□ 0.08
SOX2-OT-246ENST00000628343 MOXD2PA6NHM9 499 aa15.55■□□□□ 0.08
SOX2-OT-246ENST00000628343 STAM2O75886 525 aa15.55■□□□□ 0.08
SOX2-OT-246ENST00000628343 ARHGAP1Q07960 439 aa15.55■□□□□ 0.08
SOX2-OT-246ENST00000628343 SEMA3FQ13275 785 aa15.55■□□□□ 0.08
SOX2-OT-246ENST00000628343 AP3B2Q13367 1082 aa15.55■□□□□ 0.08
SOX2-OT-246ENST00000628343 JAKMIP3Q5VZ66 844 aa15.55■□□□□ 0.08
SOX2-OT-246ENST00000628343 XRRA1Q6P2D8 792 aa15.55■□□□□ 0.08
SOX2-OT-246ENST00000628343 PCSK9Q8NBP7 692 aaKnown RBP15.55■□□□□ 0.08
SOX2-OT-246ENST00000628343 CCDC148Q8NFR7 591 aa15.55■□□□□ 0.08
SOX2-OT-246ENST00000628343 DPF3Q92784 378 aa15.55■□□□□ 0.08
SOX2-OT-246ENST00000628343 JAK2O60674 1132 aa15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 CD2BP2O95400 341 aaKnown RBP15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 FOSP01100 380 aaPredicted RBP15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 FDPSP14324 419 aaKnown RBP15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 ITGB5P18084 799 aa15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 GNA11P29992 359 aa15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 SP2Q02086 613 aa15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 SNX17Q15036 470 aa15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 NPY5RQ15761 445 aa15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 SLC39A5Q6ZMH5 540 aa15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 REXO1Q8N1G1 1221 aaKnown RBP15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 RASGRP4Q8TDF6 673 aa15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 EHMT1Q9H9B1 1298 aa15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 ORC3Q9UBD5 711 aaPredicted RBP15.54■□□□□ 0.08
SOX2-OT-246ENST00000628343 A6NJR5 290 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 SPATA31C2B4DYI2 1134 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 EVI5O60447 810 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 GH1P01241 217 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 TGFB3P10600 412 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 UBA1P22314 1058 aaKnown RBP15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 ICAM3P32942 547 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 SREBF1P36956 1147 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 NLRP5P59047 1200 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 GNPTABQ3T906 1256 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 KCNV1Q6PIU1 500 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 CXCL17Q6UXB2 119 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 CCDC83Q8IWF9 413 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 C7orf61Q8IZ16 206 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 BICD2Q8TD16 824 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 EMID1Q96A84 441 aaPredicted RBP15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 GJB4Q9NTQ9 266 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 UBIAD1Q9Y5Z9 338 aa15.53■□□□□ 0.08
SOX2-OT-246ENST00000628343 FIBPO43427 364 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 ST18O60284 1047 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 SORBS3O60504 671 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms