RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 VSIG10LQ86VR7 867 aa16.64■□□□□ 0.25
SOX2-OT-237ENST00000625581 TEX2Q8IWB9 1127 aa16.64■□□□□ 0.25
SOX2-OT-237ENST00000625581 TRIM22Q8IYM9 498 aa16.64■□□□□ 0.25
SOX2-OT-237ENST00000625581 ARRDC4Q8NCT1 418 aa16.64■□□□□ 0.25
SOX2-OT-237ENST00000625581 SCFD2Q8WU76 684 aa16.64■□□□□ 0.25
SOX2-OT-237ENST00000625581 WDR11Q9BZH6 1224 aa16.64■□□□□ 0.25
SOX2-OT-237ENST00000625581 ZMYND12Q9H0C1 365 aa16.64■□□□□ 0.25
SOX2-OT-237ENST00000625581 C11orf49Q9H6J7 331 aa16.64■□□□□ 0.25
SOX2-OT-237ENST00000625581 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
SOX2-OT-237ENST00000625581 KBTBD13C9JR72 458 aa16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 EIF3JO75822 258 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 CDKL5O76039 1030 aa16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 DEXIO95424 95 aa16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 PCNX4Q63HM2 1172 aa16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 CPLX2Q6PUV4 134 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 ZFP91Q96JP5 570 aaPredicted RBP16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 PCDHA6Q9UN73 950 aa16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 LIMCH1Q9UPQ0 1083 aa16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 PHF24Q9UPV7 400 aa16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 PCDHA8Q9Y5H6 950 aa16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 PDE4DIPQ5VU43 2346 aa16.63■□□□□ 0.25
SOX2-OT-237ENST00000625581 CD2BP2O95400 341 aaKnown RBP16.62■□□□□ 0.25
SOX2-OT-237ENST00000625581 SEPT14Q6ZU15 432 aa16.62■□□□□ 0.25
SOX2-OT-237ENST00000625581 RNF180Q86T96 592 aa16.62■□□□□ 0.25
SOX2-OT-237ENST00000625581 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
SOX2-OT-237ENST00000625581 CCDC12Q8WUD4 166 aaPredicted RBP16.62■□□□□ 0.25
SOX2-OT-237ENST00000625581 COPS5Q92905 334 aa16.62■□□□□ 0.25
SOX2-OT-237ENST00000625581 PGBD1Q96JS3 809 aa16.62■□□□□ 0.25
SOX2-OT-237ENST00000625581 SH3GLB2Q9NR46 395 aa16.62■□□□□ 0.25
SOX2-OT-237ENST00000625581 TMEM260Q9NX78 707 aa16.62■□□□□ 0.25
SOX2-OT-237ENST00000625581 Q9Y3F1 56 aa16.62■□□□□ 0.25
SOX2-OT-237ENST00000625581 SPDYE3A6NKU9 549 aa16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 C6orf222P0C671 652 aaPredicted RBP16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 TXNP10599 105 aaKnown RBP16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 FDPSP14324 419 aaKnown RBP16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 AP3B2Q13367 1082 aa16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 TTLL4Q14679 1199 aa16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 NPY5RQ15761 445 aa16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 CCDC148Q8NFR7 591 aa16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 INPP4AQ96PE3 977 aaPredicted RBP16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 ANO3Q9BYT9 981 aa16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 GLT8D2Q9H1C3 349 aa16.61■□□□□ 0.25
SOX2-OT-237ENST00000625581 SCN10AQ9Y5Y9 1956 aa16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 NKRFO15226 690 aaKnown RBP eCLIP16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 DYNC1LI2O43237 492 aaPredicted RBP16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 JAK2O60674 1132 aa16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 STAM2O75886 525 aa16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 BEX3Q00994 111 aa16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 ARHGAP1Q07960 439 aa16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 SEMA3FQ13275 785 aa16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 KCNA10Q16322 511 aa16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 FSCN1Q16658 493 aaKnown RBP16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 LY6KQ17RY6 165 aa16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 XRRA1Q6P2D8 792 aa16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 TSEN34Q9BSV6 310 aaKnown RBP16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 SENP6Q9GZR1 1112 aaPredicted RBP16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 C6orf50Q9HD87 102 aa16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 DDX41Q9UJV9 622 aaKnown RBP16.6■□□□□ 0.25
SOX2-OT-237ENST00000625581 A0A1W2PQ45 241 aaPredicted RBP16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 A0A1W2PQY0 241 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 FOSP01100 380 aaPredicted RBP16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 ICAM3P32942 547 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 SREBF1P36956 1147 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 ACLYP53396 1101 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 SNX17Q15036 470 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 LRRC26Q2I0M4 334 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 JAKMIP3Q5VZ66 844 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 CCDC83Q8IWF9 413 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 REXO1Q8N1G1 1221 aaKnown RBP16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 OR6J1Q8NGC5 347 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 RASGRP4Q8TDF6 673 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 CRYGNQ8WXF5 182 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 HTATIP2Q9BUP3 242 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 AP5M1Q9H0R1 490 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 SPC25Q9HBM1 224 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 MRVI1Q9Y6F6 885 aa16.59■□□□□ 0.25
SOX2-OT-237ENST00000625581 MOXD2PA6NHM9 499 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 M0R2N6 131 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 ST18O60284 1047 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 ASGR1P07306 291 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 ITGB5P18084 799 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 UBA1P22314 1058 aaKnown RBP16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 GNA11P29992 359 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 SP2Q02086 613 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 GNASQ5JWF2 1037 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 DAGLBQ8NCG7 672 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 FERMT2Q96AC1 680 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 EHMT1Q9H9B1 1298 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 SH2B1Q9NRF2 756 aaPredicted RBP16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 GJB4Q9NTQ9 266 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 RTEL1Q9NZ71 1219 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 UBIAD1Q9Y5Z9 338 aa16.58■□□□□ 0.24
SOX2-OT-237ENST00000625581 LTBP2Q14767 1821 aa16.57■□□□□ 0.24
SOX2-OT-237ENST00000625581 SPATA31C2B4DYI2 1134 aa16.57■□□□□ 0.24
SOX2-OT-237ENST00000625581 FIBPO43427 364 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms