RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ENAHQ8N8S7 591 aaPredicted RBP12.94□□□□□ -0.34
DDX41-218ENST00000625286 PNMA1Q8ND90 353 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDX41-218ENST00000625286 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 IL25Q9H293 177 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 JMJD4Q9H9V9 463 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 HDAC6Q9UBN7 1215 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 PNMA2Q9UL42 364 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 RAD50Q92878 1312 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 BAZ2BQ9UIF8 2168 aaKnown RBP12.93□□□□□ -0.34
DDX41-218ENST00000625286 TRIM6-TRIM34B2RNG4 842 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 B4E1Z4 1266 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 HAS3O00219 553 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 PPP1R11O60927 126 aaPredicted RBP12.93□□□□□ -0.34
DDX41-218ENST00000625286 GH1P01241 217 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 IGHDP01880 384 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 CXCL10P02778 98 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 PCP11498 1178 aaKnown RBP12.93□□□□□ -0.34
DDX41-218ENST00000625286 CKBP12277 381 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 RBL2Q08999 1139 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 SKIV2LQ15477 1246 aaKnown RBP12.93□□□□□ -0.34
DDX41-218ENST00000625286 STAG2Q8N3U4 1231 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 NSUN6Q8TEA1 469 aaKnown RBP12.93□□□□□ -0.34
DDX41-218ENST00000625286 ESR2Q92731 530 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 RMDN3Q96TC7 470 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 EPHX3Q9H6B9 360 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 BCAS3Q9H6U6 928 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 VAT1LQ9HCJ6 419 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 GTF2IRD1Q9UHL9 959 aa12.93□□□□□ -0.34
DDX41-218ENST00000625286 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
DDX41-218ENST00000625286 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 ABCB11O95342 1321 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 ZNF213O14771 459 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 BAIAP3O94812 1187 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 SELPP16109 830 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
DDX41-218ENST00000625286 SP2Q02086 613 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 B4GALNT3Q6L9W6 998 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 LRRC8DQ7L1W4 858 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 SMC5Q8IY18 1101 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 CAGE1Q8TC20 777 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 AFAP1L1Q8TED9 768 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
DDX41-218ENST00000625286 ZFP91Q96JP5 570 aaPredicted RBP12.92□□□□□ -0.34
DDX41-218ENST00000625286 IWS1Q96ST2 819 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 ZSCAN10Q96SZ4 725 aaPredicted RBP12.92□□□□□ -0.34
DDX41-218ENST00000625286 ALG1Q9BT22 464 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 OSBPL7Q9BZF2 842 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
DDX41-218ENST00000625286 RNF41Q9H4P4 317 aaPredicted RBP12.92□□□□□ -0.34
DDX41-218ENST00000625286 CD320Q9NPF0 282 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 NOD1Q9Y239 953 aa12.92□□□□□ -0.34
DDX41-218ENST00000625286 SORBS3O60504 671 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 NR3C2P08235 984 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 ZNF286BP0CG31 522 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 CASTP20810 708 aaKnown RBP12.91□□□□□ -0.34
DDX41-218ENST00000625286 PSEN2P49810 448 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 HSD17B4P51659 736 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 GHRHRQ02643 423 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
DDX41-218ENST00000625286 STXBP2Q15833 593 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 ZNF618Q5T7W0 954 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 CWC27Q6UX04 472 aaKnown RBP12.91□□□□□ -0.34
DDX41-218ENST00000625286 FBXO11Q86XK2 927 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 IL31RAQ8NI17 732 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 GDPD5Q8WTR4 605 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
DDX41-218ENST00000625286 MTMR8Q96EF0 704 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 MPHOSPH6Q99547 160 aaKnown RBP12.91□□□□□ -0.34
DDX41-218ENST00000625286 MAF1Q9H063 256 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 OSBPL3Q9H4L5 887 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 SUGCTQ9HAC7 445 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 PXMP2Q9NR77 195 aa12.91□□□□□ -0.34
DDX41-218ENST00000625286 MYO7AQ13402 2215 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 LINC01553A4QN01 128 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 B4DLN1 442 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 KIF28PB7ZC32 967 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
DDX41-218ENST00000625286 EIF3JO75822 258 aaKnown RBP12.9□□□□□ -0.34
DDX41-218ENST00000625286 GJB5O95377 273 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 F2P00734 622 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 HOXD8P13378 290 aaPredicted RBP12.9□□□□□ -0.34
DDX41-218ENST00000625286 MRPL12P52815 198 aaKnown RBP12.9□□□□□ -0.34
DDX41-218ENST00000625286 MFSD10Q14728 455 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 DGKDQ16760 1214 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 KIAA0753Q2KHM9 967 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 HSDL1Q3SXM5 330 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 ARHGEF16Q5VV41 709 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 MYSM1Q5VVJ2 828 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 CNKSR3Q6P9H4 555 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDX41-218ENST00000625286 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 PPTC7Q8NI37 304 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 HLA-CQ95604 372 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 KAT14Q9H8E8 782 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 C11orf16Q9NQ32 467 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
DDX41-218ENST00000625286 COG5Q9UP83 839 aa12.9□□□□□ -0.34
DDX41-218ENST00000625286 CFBP00751 764 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms