RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 MOCS3O95396 460 aa16.9■□□□□ 0.3
LINC00552-201ENST00000625151 ERCC3P19447 782 aa16.9■□□□□ 0.3
LINC00552-201ENST00000625151 EIF4A3P38919 411 aaKnown RBP16.9■□□□□ 0.3
LINC00552-201ENST00000625151 BTDP43251 543 aa16.9■□□□□ 0.3
LINC00552-201ENST00000625151 TRIM58Q8NG06 486 aa16.9■□□□□ 0.3
LINC00552-201ENST00000625151 CEP95Q96GE4 821 aa16.9■□□□□ 0.3
LINC00552-201ENST00000625151 MTMR9Q96QG7 549 aa16.9■□□□□ 0.3
LINC00552-201ENST00000625151 JRKLQ9Y4A0 524 aa16.9■□□□□ 0.3
LINC00552-201ENST00000625151 TRIM66O15016 1216 aa16.89■□□□□ 0.3
LINC00552-201ENST00000625151 PLSCR1O15162 318 aa16.89■□□□□ 0.3
LINC00552-201ENST00000625151 SLC37A4O43826 429 aa16.89■□□□□ 0.3
LINC00552-201ENST00000625151 GGCXP38435 758 aa16.89■□□□□ 0.3
LINC00552-201ENST00000625151 EZH2Q15910 746 aaKnown RBP16.89■□□□□ 0.3
LINC00552-201ENST00000625151 LRRC31Q6UY01 552 aa16.89■□□□□ 0.3
LINC00552-201ENST00000625151 UNC13DQ70J99 1090 aa16.89■□□□□ 0.3
LINC00552-201ENST00000625151 MMRN2Q9H8L6 949 aa16.89■□□□□ 0.3
LINC00552-201ENST00000625151 LRRC53A6NM62 1247 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 USP17L5A8MUK1 530 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 EDIL3O43854 480 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 USO1O60763 962 aaKnown RBP16.89■□□□□ 0.29
LINC00552-201ENST00000625151 IVLP07476 585 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 GYS1P13807 737 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 ATP2B2Q01814 1243 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 CALCRLQ16602 461 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 MAN2A1Q16706 1144 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.89■□□□□ 0.29
LINC00552-201ENST00000625151 AFAP1L1Q8TED9 768 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 HDAC7Q8WUI4 952 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 LARP4BQ92615 738 aaKnown RBP16.89■□□□□ 0.29
LINC00552-201ENST00000625151 ZNF287Q9HBT7 754 aa16.89■□□□□ 0.29
LINC00552-201ENST00000625151 RRP15Q9Y3B9 282 aaKnown RBP16.89■□□□□ 0.29
LINC00552-201ENST00000625151 POTEMA6NI47 508 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 AGPSO00116 658 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 TACC1O75410 805 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 LCA5LO95447 670 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 TDP2O95551 362 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 LDHCP07864 332 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 GLIS3Q8NEA6 775 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 NUDT12Q9BQG2 462 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 LEMD3Q9Y2U8 911 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 IQCEQ6IPM2 695 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 RRAGAQ7L523 313 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 TEX11Q8IYF3 940 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 IQCDQ96DY2 449 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 STK17AQ9UEE5 414 aa16.88■□□□□ 0.29
LINC00552-201ENST00000625151 FRMPD2Q68DX3 1309 aaPredicted RBP16.88■□□□□ 0.29
LINC00552-201ENST00000625151 PVALEFA0A1B0GWK0 134 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 MRPS25P82663 173 aaKnown RBP16.87■□□□□ 0.29
LINC00552-201ENST00000625151 NFRKBQ6P4R8 1299 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 LRRC55Q6ZSA7 311 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 ZNF804AQ7Z570 1209 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 GUF1Q8N442 669 aaKnown RBP16.87■□□□□ 0.29
LINC00552-201ENST00000625151 MMGT1Q8N4V1 131 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 AENQ8WTP8 325 aaKnown RBP16.87■□□□□ 0.29
LINC00552-201ENST00000625151 BAP1Q92560 729 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 COA7Q96BR5 231 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 PSMB7Q99436 277 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 LRRC1Q9BTT6 524 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 TSPYL1Q9H0U9 437 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 DEF6Q9H4E7 631 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 SMARCAL1Q9NZC9 954 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 DMGDHQ9UI17 866 aaKnown RBP16.87■□□□□ 0.29
LINC00552-201ENST00000625151 SALL4Q9UJQ4 1053 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 ESYT2A0FGR8 921 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 AKR1B10O60218 316 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 FXR2P51116 673 aaKnown RBP eCLIP16.87■□□□□ 0.29
LINC00552-201ENST00000625151 ORC2Q13416 577 aaPredicted RBP16.87■□□□□ 0.29
LINC00552-201ENST00000625151 GRAPQ13588 217 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 KCNK18Q7Z418 384 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 C10orf67Q8IYJ2 551 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 CCDC155Q8N6L0 562 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 GOLGA6L1Q8N7Z2 621 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 GRAPLQ8TC17 118 aaPredicted RBP16.87■□□□□ 0.29
LINC00552-201ENST00000625151 OSBPL9Q96SU4 736 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 CRACR2AQ9BSW2 395 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 EHD2Q9NZN4 543 aa16.87■□□□□ 0.29
LINC00552-201ENST00000625151 TNS1Q9HBL0 1735 aaKnown RBP16.87■□□□□ 0.29
LINC00552-201ENST00000625151 SMARCA1P28370 1054 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 CXCR5P32302 372 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 SLC20A2Q08357 652 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 LRRC41Q15345 812 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 ZNF572Q7Z3I7 529 aaPredicted RBP16.86■□□□□ 0.29
LINC00552-201ENST00000625151 SPATA4Q8NEY3 305 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 RAD54LQ92698 747 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 CDK5RAP3Q96JB5 506 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 RIOX1Q9H6W3 641 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 GPR75-ASB3A0A0A6YYF3 556 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 TEX2Q8IWB9 1127 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 FAM184BQ9ULE4 1060 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 ABCB11O95342 1321 aa16.86■□□□□ 0.29
LINC00552-201ENST00000625151 NCK2O43639 380 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 PDHBP11177 359 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 ADRA2BP18089 450 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 LRRC63Q05C16 580 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 CCDC84Q86UT8 332 aaPredicted RBP16.85■□□□□ 0.29
LINC00552-201ENST00000625151 ANKRD13CQ8N6S4 541 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 DDX12PQ92771 950 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 PLEKHA4Q9H4M7 779 aa16.85■□□□□ 0.29
LINC00552-201ENST00000625151 MYH7BA7E2Y1 1941 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms