RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PTPREP23469 700 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 CCND2P30279 289 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 Q4G0T1 1027 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 ARL6IP4Q66PJ3 421 aaKnown RBP20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 PLEKHH3Q7Z736 793 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 FERMT2Q96AC1 680 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 CLIC6Q96NY7 704 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 ADD3Q9UEY8 706 aaKnown RBP20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 SRPRBQ9Y5M8 271 aaKnown RBP20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 DOCK3Q8IZD9 2030 aa20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 THSD7BQ9C0I4 1608 aa20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 DNAJC25-GNG10A0A024R161 153 aa20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 MARCH6O60337 910 aa20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 ECM2O94769 699 aaPredicted RBP20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 NR3C2P08235 984 aa20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 ALDH5A1P51649 535 aaPredicted RBP20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 CEP55Q53EZ4 464 aa20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 AXDND1Q5T1B0 1012 aaPredicted RBP20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 ADALQ6DHV7 355 aa20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 ABRAQ8N0Z2 381 aa20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 CYP2W1Q8TAV3 490 aa20.18■□□□□ 0.82
PTCHD3-202ENST00000622555 MGAMO43451 1857 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 VWA3AA6NCI4 1184 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 SOWAHBA6NEL2 793 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 ADORA2AP29274 412 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 PRPHP41219 470 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 GRIN1Q05586 938 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 XRRA1Q6P2D8 792 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 PLA2G4DQ86XP0 818 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 LENG9Q96B70 501 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 MTMR9Q96QG7 549 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 ASTN1O14525 1302 aa20.17■□□□□ 0.82
PTCHD3-202ENST00000622555 KIAA1217Q5T5P2 1943 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 IGLV3-22A0A075B6J6 115 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 MRPS9P82933 396 aaKnown RBP20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 DTHD1Q6ZMT9 781 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 VSIG10LQ86VR7 867 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 IWS1Q96ST2 819 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 MXRA8Q9BRK3 442 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 MCM3APO60318 1980 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 A0A1W2PQ27 194 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 A0A1W2PQ64 194 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 A0A1W2PQD8 194 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 TXKP42681 527 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 SETQ01105 290 aaPredicted RBP20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 IL17AQ16552 155 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 UIMC1Q96RL1 719 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 KCNMB3Q9NPA1 279 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 UBIAD1Q9Y5Z9 338 aa20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 DDX49Q9Y6V7 483 aaKnown RBP20.16■□□□□ 0.82
PTCHD3-202ENST00000622555 ZNF236Q9UL36 1845 aa20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 SLC15A5A6NIM6 579 aa20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 MEIS1O00470 390 aa20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 TBC1D8O95759 1140 aa20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 HSPA6P17066 643 aa20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 ITGB5P18084 799 aa20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 GRB14Q14449 540 aa20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 HAS1Q92839 578 aa20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 MPHOSPH6Q99547 160 aaKnown RBP20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 CSRNP2Q9H175 543 aa20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 RNF186Q9NXI6 227 aa20.15■□□□□ 0.82
PTCHD3-202ENST00000622555 LRRC37A2A6NM11 1700 aa20.14■□□□□ 0.82
PTCHD3-202ENST00000622555 B4DLN1 442 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 TBX3O15119 743 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 TRPA1O75762 1119 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 MBD3O95983 291 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 SPECC1Q5M775 1068 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 NIPA1Q7RTP0 329 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 SLFN12Q8IYM2 578 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 FSIP1Q8NA03 581 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 ZNF579Q8NAF0 562 aaKnown RBP20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 ETNPPLQ8TBG4 499 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 GPT2Q8TD30 523 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 MRPS27Q92552 414 aaKnown RBP20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 GJA10Q969M2 543 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 FGD4Q96M96 766 aa20.14■□□□□ 0.81
PTCHD3-202ENST00000622555 MSH4O15457 936 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 COBLO75128 1261 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 CMA1P23946 247 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 C1QTNF8P60827 252 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 PDE4DQ08499 809 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 STXBP2Q15833 593 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 TMEM266Q2M3C6 531 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 ZNF792Q3KQV3 632 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 SHC4Q6S5L8 630 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 DPP9Q86TI2 863 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 WDR11Q9BZH6 1224 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 JADE2Q9NQC1 790 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 TRAK2O60296 914 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 STAM2O75886 525 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 ARP10275 920 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 LONP1P36776 959 aaKnown RBP20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 TECP42680 631 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 MTMR1Q13613 665 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 SKOR2Q2VWA4 1001 aaPredicted RBP20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 RESP18Q5W5W9 173 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 FAM20AQ96MK3 541 aa20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 TTC12Q9H892 705 aaPredicted RBP20.13■□□□□ 0.81
PTCHD3-202ENST00000622555 ZSWIM8A7E2V4 1837 aa20.12■□□□□ 0.81
PTCHD3-202ENST00000622555 TNPO2O14787 897 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms