RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 REXO1Q8N1G1 1221 aaKnown RBP12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 GJA10Q969M2 543 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 DDX47Q9H0S4 455 aaKnown RBP12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 AGPSO00116 658 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 MAP2K1Q02750 393 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 MECOMQ03112 1051 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 PPP1R7Q15435 360 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 TTI2Q6NXR4 508 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 KAT2BQ92831 832 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 MEFVO15553 781 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 HIBADHP31937 336 aaKnown RBP12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 PDE6BP35913 854 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 CLNS1AP54105 237 aaKnown RBP12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 TTMPQ5BVD1 217 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 PEX26Q7Z412 305 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 CREG2Q8IUH2 290 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 MGARPQ8TDB4 240 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 SHISA4Q96DD7 197 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 ATP8A1Q9Y2Q0 1164 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 RIC1Q4ADV7 1423 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 LRRC10BA6NIK2 292 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 F8W031 263 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 PPP1R37O75864 691 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 CLTAP09496 248 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 HAUS3Q68CZ6 603 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 NLRP14Q86W24 1093 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 GIMAP8Q8ND71 665 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 LARP4BQ92615 738 aaKnown RBP12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 N4BP2L2Q92802 583 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 MTMR8Q96EF0 704 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 CCT8L2Q96SF2 557 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 TMEM260Q9NX78 707 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 PNPLA7Q6ZV29 1317 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 NFAT5O94916 1531 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 TRADDQ15628 312 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 MYOCDQ8IZQ8 938 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 CACNA2D3Q8IZS8 1091 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 ZNF473Q8WTR7 871 aaKnown RBP12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 COA7Q96BR5 231 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 PLA2G12BQ9BX93 195 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 DCP1AQ9NPI6 582 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 TOPAZ1Q8N9V7 1692 aa12.54□□□□□ -0.4
PCDHGA11-203ENST00000622044 MYH8P13535 1937 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 ZFYVE27Q5T4F4 411 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 VGLL2Q8N8G2 317 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 TCP11Q8WWU5 503 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 TACO1Q9BSH4 297 aaKnown RBP12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 CXorf56Q9H5V9 222 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 MST1RQ04912 1400 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 CRYBG1Q9Y4K1 1723 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 RHOBTB3O94955 611 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 KRT25Q7Z3Z0 450 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 MARCH10Q8NA82 808 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 LRRC45Q96CN5 670 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 ODF2LQ9ULJ1 636 aa12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
PCDHGA11-203ENST00000622044 RPS6KA5O75582 802 aa12.52□□□□□ -0.4
PCDHGA11-203ENST00000622044 SLCO1A2P46721 670 aa12.52□□□□□ -0.4
PCDHGA11-203ENST00000622044 KIRREL3Q8IZU9 778 aa12.52□□□□□ -0.4
PCDHGA11-203ENST00000622044 AENQ8WTP8 325 aaKnown RBP12.52□□□□□ -0.4
PCDHGA11-203ENST00000622044 DUSP9Q99956 384 aaKnown RBP12.52□□□□□ -0.4
PCDHGA11-203ENST00000622044 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.4
PCDHGA11-203ENST00000622044 KLRC1P26715 233 aa12.52□□□□□ -0.4
PCDHGA11-203ENST00000622044 PIGSQ96S52 555 aa12.52□□□□□ -0.4
PCDHGA11-203ENST00000622044 PCDHA6Q9UN73 950 aa12.52□□□□□ -0.4
PCDHGA11-203ENST00000622044 PCDHA8Q9Y5H6 950 aa12.52□□□□□ -0.4
PCDHGA11-203ENST00000622044 KDM3BQ7LBC6 1761 aa12.52□□□□□ -0.41
PCDHGA11-203ENST00000622044 ZNF263O14978 683 aa12.52□□□□□ -0.41
PCDHGA11-203ENST00000622044 NKRFO15226 690 aaKnown RBP eCLIP12.52□□□□□ -0.41
PCDHGA11-203ENST00000622044 BAG3O95817 575 aa12.52□□□□□ -0.41
PCDHGA11-203ENST00000622044 RUFY4Q6ZNE9 571 aa12.52□□□□□ -0.41
PCDHGA11-203ENST00000622044 ZNF512BQ96KM6 892 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA11-203ENST00000622044 TSKSQ9UJT2 592 aa12.52□□□□□ -0.41
PCDHGA11-203ENST00000622044 CD2APQ9Y5K6 639 aa12.52□□□□□ -0.41
PCDHGA11-203ENST00000622044 G3V3G9 751 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 RAD51CO43502 376 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 DHX9Q08211 1270 aaKnown RBP12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 FAM26FQ5R3K3 315 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 FAM83BQ5T0W9 1011 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 GKAP1Q5VSY0 366 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 MMGT1Q8N4V1 131 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 U2AF1L4Q8WU68 220 aaKnown RBP12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 DDX12PQ92771 950 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 ATP6V1G3Q96LB4 118 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 PACSIN1Q9BY11 444 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 ARPP21Q9UBL0 812 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 GGT7Q9UJ14 662 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 MRC1P22897 1456 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 A6NNZ2 444 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 CTNND1O60716 968 aaKnown RBP12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 CYP19A1P11511 503 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 PLS1Q14651 629 aa12.51□□□□□ -0.41
PCDHGA11-203ENST00000622044 TUBB8Q3ZCM7 444 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms