RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CYP2E1P05181 493 aaPredicted RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 POLR3DP05423 398 aaPredicted RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 EEF2P13639 858 aaKnown RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 CASTP20810 708 aaKnown RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 CTNNB1P35222 781 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 MTHFRP42898 656 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 NRIP1P48552 1158 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 MRPL12P52815 198 aaKnown RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 KLRC3Q07444 240 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 TDGQ13569 410 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 MBTPS1Q14703 1052 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 DUSP6Q16828 381 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 TPRNQ4KMQ1 711 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 CCDC158Q5M9N0 1113 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 ATAT1Q5SQI0 421 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 TMEM63BQ5T3F8 832 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 GORABQ5T7V8 394 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 ZNF618Q5T7W0 954 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 N4BP2L1Q5TBK1 243 aaPredicted RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 CWF19L1Q69YN2 538 aaKnown RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 GDF6Q6KF10 455 aaPredicted RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 CES5AQ6NT32 575 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 ANKRD54Q6NXT1 300 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 SYCE2Q6PIF2 218 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 MAMSTRQ6ZN01 415 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 RUFY4Q6ZNE9 571 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 RASGRP2Q7LDG7 609 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 ADGRA1Q86SQ6 560 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 WDR63Q8IWG1 891 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 WWC1Q8IX03 1113 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 CPXCR1Q8N123 301 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 CRIPAKQ8N1N5 446 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 ZBTB44Q8NCP5 570 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 FLCNQ8NFG4 579 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 MICAL1Q8TDZ2 1067 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 ATRIPQ8WXE1 791 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 DHX38Q92620 1227 aaKnown RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 NELL1Q92832 810 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 TSR2Q969E8 191 aaKnown RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 NXPE3Q969Y0 559 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 KIF12Q96FN5 646 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 NEUROD6Q96NK8 337 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 FAM126AQ9BYI3 521 aaPredicted RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 IFIH1Q9BYX4 1025 aaKnown RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 ACAD9Q9H845 621 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 A1CFQ9NQ94 594 aaKnown RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 CYP26B1Q9NR63 512 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 RXFP3Q9NSD7 469 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 DLGAP2Q9P1A6 1054 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 NYAP2Q9P242 653 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 IGSF9Q9P2J2 1179 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 NCDNQ9UBB6 729 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 LIMD1Q9UGP4 676 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 GTF2IRD1Q9UHL9 959 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 FEM1BQ9UK73 627 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 ZMIZ1Q9ULJ6 1067 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 SIT1Q9Y3P8 196 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 CTDP1Q9Y5B0 961 aaPredicted RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 PCDHGA2Q9Y5H1 932 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 R4GN57 208 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 MAP1BP46821 2468 aaKnown RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 OTOGLQ3ZCN5 2332 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 LOC285556D6RIA3 1793 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 A0A0G2JMZ2 1700 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 C2CD4DB7Z1M9 353 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 HAS3O00219 553 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 DGKIO75912 1065 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 UPP2O95045 317 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 ITGB1P05556 798 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 CYP7A1P22680 504 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 DNAJB1P25685 340 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 LIMK1P53667 647 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 DYNLL1P63167 89 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 ICA1Q05084 483 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 RING1Q06587 406 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 TFCP2Q12800 502 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 BTG3Q14201 252 aaPredicted RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 NONOQ15233 471 aaKnown RBP eCLIP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 DGKDQ16760 1214 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 SOWAHCQ53LP3 525 aaPredicted RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 FAM26DQ5JW98 314 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 FAM83BQ5T0W9 1011 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 CCDC62Q6P9F0 684 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 ADGRD2Q7Z7M1 963 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 RBM23Q86U06 439 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 SERINC5Q86VE9 423 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 LURAP1LQ8IV03 231 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 CMTR2Q8IYT2 770 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 MAML2Q8IZL2 1156 aaPredicted RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 CELF5Q8N6W0 485 aaKnown RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 C7orf31Q8N865 590 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 KLHL23Q8NBE8 558 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 OR6J1Q8NGC5 347 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 SCFD2Q8WU76 684 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 CHURC1Q8WUH1 139 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 AFG1LQ8WV93 481 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 POF1BQ8WVV4 589 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 KAT2BQ92831 832 aa2.86□□□□□ -1.95
CPNE3-211ENST00000621526 ACSF2Q96CM8 615 aaPredicted RBP2.86□□□□□ -1.95
CPNE3-211ENST00000621526 TRERF1Q96PN7 1200 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms