RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 TADA3O75528 432 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 HOXA10P31260 410 aaPredicted RBP10.98□□□□□ -0.65
CDH23-213ENST00000619887 DCAF17Q5H9S7 520 aaPredicted RBP10.98□□□□□ -0.65
CDH23-213ENST00000619887 SPATA20Q8TB22 786 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 LSM14BQ9BX40 385 aaKnown RBP10.98□□□□□ -0.65
CDH23-213ENST00000619887 ARMCX3Q9UH62 379 aaPredicted RBP10.98□□□□□ -0.65
CDH23-213ENST00000619887 BAZ2BQ9UIF8 2168 aaKnown RBP10.98□□□□□ -0.65
CDH23-213ENST00000619887 CAPN11Q9UMQ6 739 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 TOGARAM1Q9Y4F4 1720 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 MRFAP1Q9Y605 127 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 SMIM22K7EJ46 135 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 CFBP00751 764 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDH23-213ENST00000619887 KLHL30Q0D2K2 578 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 NAA30Q147X3 362 aaPredicted RBP10.98□□□□□ -0.65
CDH23-213ENST00000619887 DDX12PQ92771 950 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 TNFRSF25Q93038 417 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 KBTBD4Q9NVX7 518 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 FRMD4BQ9Y2L6 1034 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 ROBO3Q96MS0 1386 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 TTC26A0AVF1 554 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 TMCO5BA8MYB1 307 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 PLA2G4BP0C869 781 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 TCP1P17987 556 aaKnown RBP10.97□□□□□ -0.65
CDH23-213ENST00000619887 BMP6P22004 513 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 USP11P51784 963 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 E2F4Q16254 413 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 MRPL44Q9H9J2 332 aaKnown RBP10.97□□□□□ -0.65
CDH23-213ENST00000619887 POLLQ9UGP5 575 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 LAMA4Q16363 1823 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 A0A087X0B3 334 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 POTEMA6NI47 508 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 USP17L10C9JJH3 530 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 GCOM1H8Y6P7 765 aaPredicted RBP10.97□□□□□ -0.65
CDH23-213ENST00000619887 TDP2O95551 362 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 POLR2MP0CAP2 368 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 EEF2KMTQ96G04 330 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 CSRNP1Q96S65 589 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 ARHGEF35A5YM69 484 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 GYPCP04921 128 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 FXR1P51114 621 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDH23-213ENST00000619887 RAD51AP2Q09MP3 1159 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 ADAM9Q13443 819 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 ZNF772Q68DY9 489 aaPredicted RBP10.97□□□□□ -0.65
CDH23-213ENST00000619887 USP37Q86T82 979 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 CEP63Q96MT8 703 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 WDR24Q96S15 920 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 RIOX1Q9H6W3 641 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 NHEJ1Q9H9Q4 299 aaPredicted RBP10.97□□□□□ -0.65
CDH23-213ENST00000619887 NLRC4Q9NPP4 1024 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 HYOU1Q9Y4L1 999 aa10.97□□□□□ -0.65
CDH23-213ENST00000619887 GCNT3O95395 438 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 SRGNP10124 158 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 XRCC5P13010 732 aaKnown RBP10.96□□□□□ -0.65
CDH23-213ENST00000619887 GAP43P17677 238 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 ERCC3P19447 782 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 MAP3K9P80192 1104 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 QRICH1Q2TAL8 776 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 CPXCR1Q8N123 301 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 NKX2-3Q8TAU0 364 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 NYAP2Q9P242 653 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 GAKO14976 1311 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 GAS7O60861 476 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 LMAN1P49257 510 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 VAV2P52735 878 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 TNNC1P63316 161 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 MTF1Q14872 753 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 STRIP1Q5VSL9 837 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 ZBTB9Q96C00 473 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 EDEM3Q9BZQ6 932 aa10.96□□□□□ -0.65
CDH23-213ENST00000619887 GLI3P10071 1580 aa10.96□□□□□ -0.66
CDH23-213ENST00000619887 ABCA3Q99758 1704 aa10.96□□□□□ -0.66
CDH23-213ENST00000619887 EEF2P13639 858 aaKnown RBP10.96□□□□□ -0.66
CDH23-213ENST00000619887 TM4SF1P30408 202 aa10.96□□□□□ -0.66
CDH23-213ENST00000619887 RDXP35241 583 aaKnown RBP10.96□□□□□ -0.66
CDH23-213ENST00000619887 HDLBPQ00341 1268 aaKnown RBP10.96□□□□□ -0.66
CDH23-213ENST00000619887 SMC1AQ14683 1233 aaKnown RBP10.96□□□□□ -0.66
CDH23-213ENST00000619887 CDC42EP5Q6NZY7 148 aa10.96□□□□□ -0.66
CDH23-213ENST00000619887 RAD9BQ6WBX8 426 aa10.96□□□□□ -0.66
CDH23-213ENST00000619887 KRT26Q7Z3Y9 468 aa10.96□□□□□ -0.66
CDH23-213ENST00000619887 BICD1Q96G01 975 aa10.96□□□□□ -0.66
CDH23-213ENST00000619887 CHMP2AO43633 222 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 HSF2BPO75031 334 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 FLOT1O75955 427 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 GDF11O95390 407 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 NEFHP12036 1026 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 LRRC41Q15345 812 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 GRIPAP1Q4V328 841 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 MYCT1Q8N699 235 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 FAM20AQ96MK3 541 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 PARD6BQ9BYG5 372 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 PNMA2Q9UL42 364 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 RABGAP1Q9Y3P9 1069 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 DUOX1Q9NRD9 1551 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 OPA1O60313 960 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 ECE2O60344 883 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 UTP14CQ5TAP6 766 aaKnown RBP10.95□□□□□ -0.66
CDH23-213ENST00000619887 ANKRD40Q6AI12 368 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 GOLGA5Q8TBA6 731 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms