RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 RLFQ13129 1914 aa31.36■■■□□ 2.61
BRF1-221ENST00000619151 LOC285556D6RIA3 1793 aa31.36■■■□□ 2.61
BRF1-221ENST00000619151 ATP2A1O14983 1001 aa31.36■■■□□ 2.61
BRF1-221ENST00000619151 KARSQ15046 597 aaKnown RBP31.36■■■□□ 2.61
BRF1-221ENST00000619151 TKFCQ3LXA3 575 aa31.36■■■□□ 2.61
BRF1-221ENST00000619151 CYP4F22Q6NT55 531 aa31.36■■■□□ 2.61
BRF1-221ENST00000619151 SH3RF1Q7Z6J0 888 aa31.36■■■□□ 2.61
BRF1-221ENST00000619151 REPS2Q8NFH8 660 aa31.36■■■□□ 2.61
BRF1-221ENST00000619151 CALML4Q96GE6 196 aa31.36■■■□□ 2.61
BRF1-221ENST00000619151 PAGE5Q96GU1 130 aa31.36■■■□□ 2.61
BRF1-221ENST00000619151 MANSC4A6NHS7 340 aaPredicted RBP31.35■■■□□ 2.61
BRF1-221ENST00000619151 MKRN3Q13064 507 aaKnown RBP31.35■■■□□ 2.61
BRF1-221ENST00000619151 HAS1Q92839 578 aa31.35■■■□□ 2.61
BRF1-221ENST00000619151 TRERF1Q96PN7 1200 aa31.35■■■□□ 2.61
BRF1-221ENST00000619151 MAF1Q9H063 256 aa31.35■■■□□ 2.61
BRF1-221ENST00000619151 CBX8Q9HC52 389 aa31.35■■■□□ 2.61
BRF1-221ENST00000619151 PCDHA12Q9UN75 941 aa31.35■■■□□ 2.61
BRF1-221ENST00000619151 PCDHA5Q9Y5H7 936 aa31.35■■■□□ 2.61
BRF1-221ENST00000619151 PP2D1A8MPX8 630 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 NFIBO00712 420 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 HSPA6P17066 643 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 CDC25AP30304 524 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 PRR16Q569H4 304 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 NT5DC1Q5TFE4 455 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 TRIML1Q8N9V2 468 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 SLC26A4O43511 780 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 KRT79Q5XKE5 535 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 PDXDC2PQ6P474 469 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 GADL1Q6ZQY3 521 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 FAM20AQ96MK3 541 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 HOMER2Q9NSB8 354 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 AGTPBP1Q9UPW5 1226 aa31.34■■■□□ 2.61
BRF1-221ENST00000619151 CCL15-CCL14A0A0B4J2E2 113 aa31.33■■■□□ 2.61
BRF1-221ENST00000619151 SPDYE16A6NNV3 312 aaPredicted RBP31.33■■■□□ 2.61
BRF1-221ENST00000619151 FOXN1O15353 648 aa31.33■■■□□ 2.61
BRF1-221ENST00000619151 HOXA7P31268 230 aaPredicted RBP31.33■■■□□ 2.61
BRF1-221ENST00000619151 INHBEP58166 350 aa31.33■■■□□ 2.61
BRF1-221ENST00000619151 NOGQ13253 232 aa31.33■■■□□ 2.61
BRF1-221ENST00000619151 CCL15Q16663 113 aa31.33■■■□□ 2.61
BRF1-221ENST00000619151 BRI3BPQ8WY22 251 aa31.33■■■□□ 2.61
BRF1-221ENST00000619151 CAPNS2Q96L46 248 aa31.33■■■□□ 2.61
BRF1-221ENST00000619151 TEX13BQ9BXU2 312 aa31.33■■■□□ 2.61
BRF1-221ENST00000619151 RNF146Q9NTX7 359 aa31.33■■■□□ 2.61
BRF1-221ENST00000619151 BIN1O00499 593 aa31.32■■■□□ 2.6
BRF1-221ENST00000619151 PRR29P0C7W0 189 aa31.32■■■□□ 2.6
BRF1-221ENST00000619151 AFMP43652 599 aa31.32■■■□□ 2.6
BRF1-221ENST00000619151 SNRNP48Q6IEG0 339 aaKnown RBP31.32■■■□□ 2.6
BRF1-221ENST00000619151 GPAT2Q6NUI2 795 aa31.32■■■□□ 2.6
BRF1-221ENST00000619151 C11orf57Q6ZUT1 292 aaPredicted RBP31.32■■■□□ 2.6
BRF1-221ENST00000619151 PAXIP1Q6ZW49 1069 aaPredicted RBP31.32■■■□□ 2.6
BRF1-221ENST00000619151 MB21D1Q8N884 522 aa31.32■■■□□ 2.6
BRF1-221ENST00000619151 CDK5RAP3Q96JB5 506 aa31.32■■■□□ 2.6
BRF1-221ENST00000619151 STK24Q9Y6E0 443 aa31.32■■■□□ 2.6
BRF1-221ENST00000619151 FAM86B1E9PN63 330 aa31.31■■■□□ 2.6
BRF1-221ENST00000619151 MYL1P05976 194 aa31.31■■■□□ 2.6
BRF1-221ENST00000619151 FAM86B2P0C5J1 330 aa31.31■■■□□ 2.6
BRF1-221ENST00000619151 CCDC173Q0VFZ6 552 aa31.31■■■□□ 2.6
BRF1-221ENST00000619151 MUM1L1Q5H9M0 696 aa31.31■■■□□ 2.6
BRF1-221ENST00000619151 TREML2Q5T2D2 321 aa31.31■■■□□ 2.6
BRF1-221ENST00000619151 ETNPPLQ8TBG4 499 aa31.31■■■□□ 2.6
BRF1-221ENST00000619151 BPIFA3Q9BQP9 254 aa31.31■■■□□ 2.6
BRF1-221ENST00000619151 ZNF214Q9UL59 606 aaPredicted RBP31.31■■■□□ 2.6
BRF1-221ENST00000619151 COL11A1P12107 1806 aaPredicted RBP31.31■■■□□ 2.6
BRF1-221ENST00000619151 RPTORQ8N122 1335 aa31.3■■■□□ 2.6
BRF1-221ENST00000619151 GTPBP6O43824 516 aaPredicted RBP31.3■■■□□ 2.6
BRF1-221ENST00000619151 SARSP49591 514 aaKnown RBP31.3■■■□□ 2.6
BRF1-221ENST00000619151 HTRA3P83110 453 aa31.3■■■□□ 2.6
BRF1-221ENST00000619151 SETQ01105 290 aaPredicted RBP31.3■■■□□ 2.6
BRF1-221ENST00000619151 GRAMD1CQ8IYS0 662 aa31.3■■■□□ 2.6
BRF1-221ENST00000619151 SPATA20Q8TB22 786 aa31.3■■■□□ 2.6
BRF1-221ENST00000619151 DACH1Q9UI36 760 aa31.3■■■□□ 2.6
BRF1-221ENST00000619151 SLC45A1Q9Y2W3 748 aa31.3■■■□□ 2.6
BRF1-221ENST00000619151 GOLGA6L19H0YKK7 550 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 PABPC4Q13310 644 aaKnown RBP eCLIP31.29■■■□□ 2.6
BRF1-221ENST00000619151 TMEM132BQ14DG7 1078 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 DPCR1Q3MIW9 517 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 RNF207Q6ZRF8 634 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 ANKRD23Q86SG2 305 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 SNX29Q8TEQ0 813 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 LENG9Q96B70 501 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 GSDMAQ96QA5 445 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 MAN1B1Q9UKM7 699 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 KDM3AQ9Y4C1 1321 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 POTEMA6NI47 508 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 BECN2A8MW95 431 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 PLCG1P19174 1290 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 IRX3P78415 501 aaPredicted RBP31.29■■■□□ 2.6
BRF1-221ENST00000619151 DPYDQ12882 1025 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 LUZP1Q86V48 1076 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 SYTL5Q8TDW5 730 aaPredicted RBP31.29■■■□□ 2.6
BRF1-221ENST00000619151 PTPN18Q99952 460 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 STK17AQ9UEE5 414 aa31.29■■■□□ 2.6
BRF1-221ENST00000619151 BTBD19C9JJ37 291 aa31.28■■■□□ 2.6
BRF1-221ENST00000619151 TM4SF4P48230 202 aa31.28■■■□□ 2.6
BRF1-221ENST00000619151 SREBF2Q12772 1141 aa31.28■■■□□ 2.6
BRF1-221ENST00000619151 CEP55Q53EZ4 464 aa31.28■■■□□ 2.6
BRF1-221ENST00000619151 MMTAG2Q9BU76 263 aaKnown RBP31.28■■■□□ 2.6
BRF1-221ENST00000619151 FRMPD4Q14CM0 1322 aa31.27■■■□□ 2.6
BRF1-221ENST00000619151 STAT3P40763 770 aa31.27■■■□□ 2.6
BRF1-221ENST00000619151 RPS6P62753 249 aaKnown RBP31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms