RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 SALL4Q9UJQ4 1053 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 GSG1L2A8MUP6 293 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 CLCN2P51788 898 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 HSPA2P54652 639 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 A0A1W2PP64 1363 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 PDE6AP16499 860 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 ERCC5P28715 1186 aaPredicted RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 CDC25BP30305 580 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 MCCD1P59942 119 aaPredicted RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 TCERG1LQ5VWI1 586 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 DIS3L2Q8IYB7 885 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 PAPOLBQ9NRJ5 636 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 WDR7Q9Y4E6 1490 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 KRT6AP02538 564 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 KRT6BP04259 564 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 LONP1P36776 959 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 KRT6CP48668 564 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 GJB7Q6PEY0 223 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 DYMQ7RTS9 669 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 AIDAQ96BJ3 306 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 LRP2BPQ9P2M1 347 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 DIXDC1Q155Q3 683 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 TEKT4Q8WW24 435 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 KDM4CQ9H3R0 1056 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 SLC39A2Q9NP94 309 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 KRT3P12035 628 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 COPB1P53618 953 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 LRRC49Q8IUZ0 686 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 TAB3Q8N5C8 712 aaPredicted RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 KBTBD3Q8NAB2 608 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 HIC2Q96JB3 615 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 WDR91A4D1P6 747 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 IFI35P80217 286 aaPredicted RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 CCDC122Q5T0U0 273 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 DDI1Q8WTU0 396 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 SYBUQ9NX95 663 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 THRAP3Q9Y2W1 955 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 CUL1Q13616 776 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 BYSLQ13895 437 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 CYTH1Q15438 398 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 FAM47EQ6ZV65 393 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 VSTM4Q8IW00 320 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 CMTM5Q96DZ9 223 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 GCFC2P16383 781 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 CTNNA2P26232 953 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 IFIT5Q13325 482 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 USPL1Q5W0Q7 1092 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 KIFC2Q96AC6 838 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 LRRC37BQ96QE4 947 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 IWS1Q96ST2 819 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 FAM192AQ9GZU8 254 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 TTC26A0AVF1 554 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 TRIM49BA6NDI0 452 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 ZBTB43O43298 467 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 ATP1A1P05023 1023 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 PARP1P09874 1014 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 MFSD4BQ5TF39 518 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 FAM96AQ9H5X1 160 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 PARP3Q9Y6F1 533 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 NACADO15069 1562 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 EPHB6O15197 1021 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 PTPREP23469 700 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 FNTAP49354 379 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 CARSP49589 748 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 TSEN2Q8NCE0 465 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 TRIM33Q9UPN9 1127 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 ERFP50548 548 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 ACBD5Q5T8D3 534 aaPredicted RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 SLF2Q8IX21 1173 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 GPKOWQ92917 476 aaPredicted RBP eCLIP3.35□□□□□ -1.87
NEB-220ENST00000618972 MYL1P05976 194 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 STAT3P40763 770 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 HDAC4P56524 1084 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 SUSD4Q5VX71 490 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 RRAGAQ7L523 313 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 ZFPM1Q8IX07 1006 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 CCDC63Q8NA47 563 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 CCDC197Q8NCU1 140 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 UBAC1Q9BSL1 405 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 ESYT3A0FGR9 886 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 ITGA4P13612 1032 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 TXKP42681 527 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 KRT31Q15323 416 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 CCDC96Q2M329 555 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 FNBP4Q8N3X1 1017 aaPredicted RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 ATL2Q8NHH9 583 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 MAP3K7O43318 606 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 MAGEA1P43355 309 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 PSMC4P43686 418 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 SDR16C5Q8N3Y7 309 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 CCT6BQ92526 530 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 G3BP2Q9UN86 482 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 NR2E1Q9Y466 385 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 XPOTO43592 962 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 KRT8P05787 483 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 PDE6CP51160 858 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 BASP1P80723 227 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 SHROOM1Q2M3G4 852 aaPredicted RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 TRIM60Q495X7 471 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms