RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 ART3Q13508 389 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 DYMQ7RTS9 669 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 NACC1Q96RE7 527 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 MXD3Q9BW11 206 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ATF5Q9Y2D1 282 aaPredicted RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 COMMD10Q9Y6G5 202 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 NCOA3Q9Y6Q9 1424 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 MAPK13O15264 365 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 GCNT3O95395 438 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 KRT15P19012 456 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ADD2P35612 726 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 FAM47AQ5JRC9 791 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 TTC19Q6DKK2 380 aaPredicted RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 ZNF654Q8IZM8 581 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 NSMCE1Q8WV22 266 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 FUT8Q9BYC5 575 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 IRF6O14896 467 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 EPHB4P54760 987 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SLMAPQ14BN4 828 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 MUM1L1Q5H9M0 696 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 CASC4Q6P4E1 433 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 GPBP1Q86WP2 473 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ZNF713Q8N859 430 aaPredicted RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 PSD3Q9NYI0 1048 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 IFNB1P01574 187 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SCG2P13521 617 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 IFNAR1P17181 557 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 HSPA1LP34931 641 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 NR1H3Q13133 447 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 MYBPC2Q14324 1141 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 FAM102BQ5T8I3 360 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 PDZD4Q76G19 769 aaPredicted RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 RNF34Q969K3 372 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 RILPQ96NA2 401 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 DRC3Q9H069 523 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 BIN2Q9UBW5 565 aaPredicted RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 STK38LQ9Y2H1 464 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 CARNS1A5YM72 827 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 FAM187AA6NFU0 413 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SOWAHDA6NJG2 315 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 UFL1O94874 794 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ABCD1P33897 745 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 RPUSD2Q8IZ73 545 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 STRBPQ96SI9 672 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 PSMB7Q99436 277 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 KCND1Q9NSA2 647 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 DONSONQ9NYP3 566 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.32□□□□□ -1.88
LPP-221ENST00000618621 ARHGEF10O15013 1369 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 GAS7O60861 476 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SRGAP2O75044 1071 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 CYP21A2P08686 494 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ATF2P15336 505 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 GCFC2P16383 781 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 NR1I3Q14994 352 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 NLRX1Q86UT6 975 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 NELFCDQ8IXH7 590 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 LRRC8CQ8TDW0 803 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 LEMD3Q9Y2U8 911 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 GJA3Q9Y6H8 435 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ERBB3P21860 1342 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 STAM2O75886 525 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 HNRNPH1P31943 449 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 PSMC4P43686 418 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 POM121Q96HA1 1249 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 NUF2Q9BZD4 464 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SH2D4AQ9H788 454 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 TRPC6Q9Y210 931 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 H7C1W4 665 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 NDUFA10O95299 355 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 GGCXP38435 758 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 TAF6LQ9Y6J9 622 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 EDC4Q6P2E9 1401 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 IPO5O00410 1097 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 GUCY2CP25092 1073 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ARHGAP4P98171 946 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SF3A3Q12874 501 aaKnown RBP eCLIP3.32□□□□□ -1.88
LPP-221ENST00000618621 FAM196AQ6ZSG2 479 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 PIGBQ92521 554 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 PUS3Q9BZE2 481 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 KANSL2Q9H9L4 492 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 BUB1O43683 1085 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 STX2P32856 288 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 CYP27A1Q02318 531 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 STAG1Q8WVM7 1258 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 HNRNPLLQ8WVV9 542 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 STAMQ92783 540 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 HOOK2Q96ED9 719 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ARHGEF10LQ9HCE6 1279 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 PCDHA1Q9Y5I3 950 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 KIF14Q15058 1648 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SLFN12LQ6IEE8 588 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 EPSTI1Q96J88 318 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 PITPNM3Q9BZ71 974 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 AZI2Q9H6S1 392 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 PFDN4Q9NQP4 134 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 INTS9Q9NV88 658 aaKnown RBP3.32□□□□□ -1.88
LPP-221ENST00000618621 EPS15L1Q9UBC2 864 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 MRFAP1Q9Y605 127 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms