RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 TBC1D12O60347 775 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 ZRSR1Q15695 479 aaKnown RBP13.49□□□□□ -0.25
SRRT-216ENST00000618262 SLC35G1Q2M3R5 365 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 USH1GQ495M9 461 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 ACBD5Q5T8D3 534 aaPredicted RBP13.49□□□□□ -0.25
SRRT-216ENST00000618262 GBP6Q6ZN66 633 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 CPXCR1Q8N123 301 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 LAMB1P07942 1786 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 IGKV6D-41A0A0C4DH26 115 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 KRT38O76015 456 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 PYGBP11216 843 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 GCFC2P16383 781 aaKnown RBP13.48□□□□□ -0.25
SRRT-216ENST00000618262 GJA5P36382 358 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 ZNF157P51786 506 aaPredicted RBP13.48□□□□□ -0.25
SRRT-216ENST00000618262 TREML2Q5T2D2 321 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 CCDC174Q6PII3 467 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 LSM14AQ8ND56 463 aaKnown RBP13.48□□□□□ -0.25
SRRT-216ENST00000618262 HOMER2Q9NSB8 354 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 MAD2L2Q9UI95 211 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 USP17L10C9JJH3 530 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 CYTH3O43739 400 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 IVLP07476 585 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
SRRT-216ENST00000618262 PCP11498 1178 aaKnown RBP13.48□□□□□ -0.25
SRRT-216ENST00000618262 CCNHP51946 323 aaPredicted RBP13.48□□□□□ -0.25
SRRT-216ENST00000618262 ZNF280CQ8ND82 737 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 SNX21Q969T3 373 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 TRIM7Q9C029 511 aa13.48□□□□□ -0.25
SRRT-216ENST00000618262 SMTNL1A8MU46 457 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 PARNO95453 639 aaKnown RBP13.47□□□□□ -0.25
SRRT-216ENST00000618262 FAM173BQ6P4H8 233 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 SGMS1Q86VZ5 419 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 AGXT2Q9BYV1 514 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
SRRT-216ENST00000618262 EMILIN3Q9NT22 766 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 SPATA7Q9P0W8 599 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 KCNJ14Q9UNX9 436 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 PPP2R3BQ9Y5P8 575 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 PFKFB2O60825 505 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 MYL1P05976 194 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 MYCLP1P12525 358 aaPredicted RBP13.47□□□□□ -0.25
SRRT-216ENST00000618262 SNX1Q13596 522 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 MCTP1Q6DN14 999 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 CYP4F22Q6NT55 531 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 NSUN7Q8NE18 718 aaKnown RBP13.47□□□□□ -0.25
SRRT-216ENST00000618262 ORC3Q9UBD5 711 aaPredicted RBP13.47□□□□□ -0.25
SRRT-216ENST00000618262 V9GYY5 206 aaPredicted RBP13.47□□□□□ -0.25
SRRT-216ENST00000618262 SCN4AP35499 1836 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 EME2A4GXA9 379 aaPredicted RBP13.47□□□□□ -0.25
SRRT-216ENST00000618262 FLOT1O75955 427 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 TGFB3P10600 412 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 VDRP11473 427 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 DDIT3P35638 169 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 PTK7Q13308 1070 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 NEDD9Q14511 834 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 PDIA5Q14554 519 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 PREPLQ4J6C6 727 aaPredicted RBP13.47□□□□□ -0.25
SRRT-216ENST00000618262 FAM81BQ96LP2 452 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 PIGSQ96S52 555 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 BAG1Q99933 345 aaPredicted RBP13.47□□□□□ -0.25
SRRT-216ENST00000618262 MAP3K20Q9NYL2 800 aaKnown RBP13.47□□□□□ -0.25
SRRT-216ENST00000618262 VPS54Q9P1Q0 977 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 KLF15Q9UIH9 416 aa13.47□□□□□ -0.25
SRRT-216ENST00000618262 ADAMTS3O15072 1205 aa13.46□□□□□ -0.25
SRRT-216ENST00000618262 TOMM70O94826 608 aa13.46□□□□□ -0.25
SRRT-216ENST00000618262 PLS1Q14651 629 aa13.46□□□□□ -0.25
SRRT-216ENST00000618262 TBC1D5Q92609 795 aa13.46□□□□□ -0.25
SRRT-216ENST00000618262 COA7Q96BR5 231 aa13.46□□□□□ -0.25
SRRT-216ENST00000618262 ZNF274Q96GC6 653 aaPredicted RBP13.46□□□□□ -0.25
SRRT-216ENST00000618262 UIMC1Q96RL1 719 aa13.46□□□□□ -0.25
SRRT-216ENST00000618262 RPAP3Q9H6T3 665 aaPredicted RBP13.46□□□□□ -0.25
SRRT-216ENST00000618262 MRFAP1Q9Y605 127 aa13.46□□□□□ -0.25
SRRT-216ENST00000618262 MYH8P13535 1937 aa13.46□□□□□ -0.25
SRRT-216ENST00000618262 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.26
SRRT-216ENST00000618262 CRYMQ14894 314 aa13.46□□□□□ -0.26
SRRT-216ENST00000618262 HEATR3Q7Z4Q2 680 aa13.46□□□□□ -0.26
SRRT-216ENST00000618262 ENOX1Q8TC92 643 aaKnown RBP13.46□□□□□ -0.26
SRRT-216ENST00000618262 F8VZ95 297 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 CYP2C8P10632 490 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 PRPHP41219 470 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 BACE1P56817 501 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 ZBED6P86452 979 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 MAP3K10Q02779 954 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 CAVIN1Q6NZI2 390 aaKnown RBP13.45□□□□□ -0.26
SRRT-216ENST00000618262 SMC1BQ8NDV3 1235 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 ZSCAN16Q9H4T2 348 aaPredicted RBP13.45□□□□□ -0.26
SRRT-216ENST00000618262 ZNF112Q9UJU3 913 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 TMX2Q9Y320 296 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 BMP3P12645 472 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 CYP11B2P19099 503 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 SMARCA1P28370 1054 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 CORO7P57737 925 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 MYO1HQ8N1T3 1032 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 HOOK2Q96ED9 719 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 IL17RAQ96F46 866 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 CENPOQ9BU64 300 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 TCP11L1Q9NUJ3 509 aa13.45□□□□□ -0.26
SRRT-216ENST00000618262 NYAP2Q9P242 653 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms