RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 FAM83BQ5T0W9 1011 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 SYDE2Q5VT97 1194 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 SUPT20HQ8NEM7 779 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 KIFC2Q96AC6 838 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 MTMR8Q96EF0 704 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 CNOT6LQ96LI5 555 aaKnown RBP13.86□□□□□ -0.19
CIITA-212ENST00000618207 CHP1Q99653 195 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 TUBGCP2Q9BSJ2 902 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 CUEDC2Q9H467 287 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 KCND1Q9NSA2 647 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 ZNF70Q9UC06 446 aaPredicted RBP13.86□□□□□ -0.19
CIITA-212ENST00000618207 CCP110O43303 1012 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 SF3B2Q13435 895 aaKnown RBP13.86□□□□□ -0.19
CIITA-212ENST00000618207 PPP4R3AQ6IN85 833 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 GLIS2Q9BZE0 524 aaPredicted RBP13.86□□□□□ -0.19
CIITA-212ENST00000618207 TMEM51Q9NW97 253 aa13.86□□□□□ -0.19
CIITA-212ENST00000618207 TTC26A0AVF1 554 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 LRRC10BA6NIK2 292 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 SPDYE3A6NKU9 549 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 CCNE1P24864 410 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 FKBP1AP62942 108 aaKnown RBP13.85□□□□□ -0.19
CIITA-212ENST00000618207 ERVK-24P63145 666 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 PPP1R18Q6NYC8 613 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 CNNM4Q6P4Q7 775 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 CNGA4Q8IV77 575 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 RAD54LQ92698 747 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 SLF1Q9BQI6 1058 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 SEMA6BQ9H3T3 888 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 ABHD10Q9NUJ1 306 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 TFR2Q9UP52 801 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
CIITA-212ENST00000618207 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.85□□□□□ -0.19
CIITA-212ENST00000618207 TNS1Q9HBL0 1735 aaKnown RBP13.85□□□□□ -0.19
CIITA-212ENST00000618207 POTEFA5A3E0 1075 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 ENTPD3O75355 529 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 CCDC175P0C221 793 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 POTEIP0CG38 1075 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 ARHGAP4P98171 946 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 TBC1D8BQ0IIM8 1120 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 NBPF9Q3BBW0 867 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 NCAPH2Q6IBW4 605 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 POTEGQ6S5H5 508 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 POTEEQ6S8J3 1075 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 NELFCDQ8IXH7 590 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 PANX2Q96RD6 677 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 ZSWIM4Q9H7M6 989 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
CIITA-212ENST00000618207 MYL1P05976 194 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
CIITA-212ENST00000618207 ZNF76P36508 570 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 MB21D1Q8N884 522 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 NOC4LQ9BVI4 516 aaKnown RBP13.84□□□□□ -0.19
CIITA-212ENST00000618207 FGFBP2Q9BYJ0 223 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 FBXO28Q9NVF7 368 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 HDAC9Q9UKV0 1011 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 ADGRG1Q9Y653 693 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 CASQ1P31415 396 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 PDIA5Q14554 519 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 DHTKD1Q96HY7 919 aaPredicted RBP13.84□□□□□ -0.19
CIITA-212ENST00000618207 CARD6Q9BX69 1037 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 AGPAT5Q9NUQ2 364 aa13.84□□□□□ -0.19
CIITA-212ENST00000618207 GREB1LQ9C091 1923 aaPredicted RBP13.83□□□□□ -0.19
CIITA-212ENST00000618207 FAM86B1E9PN63 330 aa13.83□□□□□ -0.19
CIITA-212ENST00000618207 KRT18P05783 430 aaKnown RBP13.83□□□□□ -0.19
CIITA-212ENST00000618207 FAM86B2P0C5J1 330 aa13.83□□□□□ -0.19
CIITA-212ENST00000618207 KCNA3P22001 575 aa13.83□□□□□ -0.19
CIITA-212ENST00000618207 SYCP1Q15431 976 aa13.83□□□□□ -0.19
CIITA-212ENST00000618207 EPC1Q9H2F5 836 aa13.83□□□□□ -0.19
CIITA-212ENST00000618207 MAGEF1Q9HAY2 307 aa13.83□□□□□ -0.19
CIITA-212ENST00000618207 STK17AQ9UEE5 414 aa13.83□□□□□ -0.19
CIITA-212ENST00000618207 LGALS16A8MUM7 142 aa13.83□□□□□ -0.2
CIITA-212ENST00000618207 MED24O75448 989 aa13.83□□□□□ -0.2
CIITA-212ENST00000618207 STAT2P52630 851 aa13.83□□□□□ -0.2
CIITA-212ENST00000618207 DGKZQ13574 1117 aa13.83□□□□□ -0.2
CIITA-212ENST00000618207 UNC13DQ70J99 1090 aa13.83□□□□□ -0.2
CIITA-212ENST00000618207 ANKRD7Q92527 254 aa13.83□□□□□ -0.2
CIITA-212ENST00000618207 THAP9Q9H5L6 903 aa13.83□□□□□ -0.2
CIITA-212ENST00000618207 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.2
CIITA-212ENST00000618207 COL4A5P29400 1685 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 BICDL2A1A5D9 508 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 CHMP2AO43633 222 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 PSMC6P62333 389 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 PABPC4Q13310 644 aaKnown RBP eCLIP13.82□□□□□ -0.2
CIITA-212ENST00000618207 NIM1KQ8IY84 436 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 ARHGEF10LQ9HCE6 1279 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 OPLAHO14841 1288 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 EGFRP00533 1210 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 EEF1GP26641 437 aaKnown RBP13.82□□□□□ -0.2
CIITA-212ENST00000618207 CBX1P83916 185 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 ARHGAP29Q52LW3 1261 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 GPBP1Q86WP2 473 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 RTKN2Q8IZC4 609 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 CCDC155Q8N6L0 562 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 MNS1Q8NEH6 495 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 TRIM10Q9UDY6 481 aa13.82□□□□□ -0.2
CIITA-212ENST00000618207 ZHX1Q9UKY1 873 aaPredicted RBP13.82□□□□□ -0.2
CIITA-212ENST00000618207 LUC7L2Q9Y383 392 aaKnown RBP13.82□□□□□ -0.2
CIITA-212ENST00000618207 TFRCP02786 760 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms