RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 KCNMB3Q9NPA1 279 aa19.64■□□□□ 0.73
CNOT3-209ENST00000617930 FBXO28Q9NVF7 368 aa19.64■□□□□ 0.73
CNOT3-209ENST00000617930 OTOFQ9HC10 1997 aa19.64■□□□□ 0.73
CNOT3-209ENST00000617930 MYMKA6NI61 221 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 MYL1P05976 194 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 SFPQP23246 707 aaKnown RBP eCLIP19.63■□□□□ 0.73
CNOT3-209ENST00000617930 PBX1P40424 430 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 STK4Q13043 487 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 PRKG1Q13976 671 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 TMEM139Q8IV31 216 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 LENG9Q96B70 501 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 WRNIP1Q96S55 665 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 PITPNM2Q9BZ72 1349 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 FCER1AP12319 257 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 USP11P51784 963 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 STAT2P52630 851 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 TMEM119Q4V9L6 283 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 KLRG1Q96E93 195 aa19.63■□□□□ 0.73
CNOT3-209ENST00000617930 GLTPD2A6NH11 291 aa19.62■□□□□ 0.73
CNOT3-209ENST00000617930 FAM86B1E9PN63 330 aa19.62■□□□□ 0.73
CNOT3-209ENST00000617930 FAM86B2P0C5J1 330 aa19.62■□□□□ 0.73
CNOT3-209ENST00000617930 ARHGAP4P98171 946 aa19.62■□□□□ 0.73
CNOT3-209ENST00000617930 SYCP1Q15431 976 aa19.62■□□□□ 0.73
CNOT3-209ENST00000617930 PTPN14Q15678 1187 aa19.62■□□□□ 0.73
CNOT3-209ENST00000617930 GLT8D2Q9H1C3 349 aa19.62■□□□□ 0.73
CNOT3-209ENST00000617930 MAGEF1Q9HAY2 307 aa19.62■□□□□ 0.73
CNOT3-209ENST00000617930 TRMT1Q9NXH9 659 aaKnown RBP19.62■□□□□ 0.73
CNOT3-209ENST00000617930 LRRC10BA6NIK2 292 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 GCFC2P16383 781 aaKnown RBP19.61■□□□□ 0.73
CNOT3-209ENST00000617930 SMAP1Q8IYB5 467 aaPredicted RBP19.61■□□□□ 0.73
CNOT3-209ENST00000617930 CCAR2Q8N163 923 aaKnown RBP19.61■□□□□ 0.73
CNOT3-209ENST00000617930 CYP2W1Q8TAV3 490 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 SNX29Q8TEQ0 813 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 CALML4Q96GE6 196 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 PCDHA12Q9UN75 941 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 USP2O75604 605 aaPredicted RBP19.61■□□□□ 0.73
CNOT3-209ENST00000617930 EPHX2P34913 555 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 STAT3P40763 770 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 NCBP1Q09161 790 aaKnown RBP19.61■□□□□ 0.73
CNOT3-209ENST00000617930 AP3B2Q13367 1082 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 KRT31Q15323 416 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 TMEM266Q2M3C6 531 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 SPECC1LQ69YQ0 1117 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 SCYL3Q8IZE3 742 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 TC2NQ8N9U0 490 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 ETNPPLQ8TBG4 499 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 GOPCQ9HD26 462 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 KCND1Q9NSA2 647 aa19.61■□□□□ 0.73
CNOT3-209ENST00000617930 POTEIP0CG38 1075 aa19.6■□□□□ 0.73
CNOT3-209ENST00000617930 POTEJP0CG39 1038 aa19.6■□□□□ 0.73
CNOT3-209ENST00000617930 SPIRE1Q08AE8 756 aa19.6■□□□□ 0.73
CNOT3-209ENST00000617930 DCAF15Q66K64 600 aa19.6■□□□□ 0.73
CNOT3-209ENST00000617930 KIAA0895Q8NCT3 520 aa19.6■□□□□ 0.73
CNOT3-209ENST00000617930 RAD54LQ92698 747 aa19.6■□□□□ 0.73
CNOT3-209ENST00000617930 LIMA1Q9UHB6 759 aaKnown RBP19.6■□□□□ 0.73
CNOT3-209ENST00000617930 PPP2R3BQ9Y5P8 575 aa19.6■□□□□ 0.73
CNOT3-209ENST00000617930 PTPRAP18433 802 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 SREBF1P36956 1147 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 ADKP55263 362 aaKnown RBP19.59■□□□□ 0.73
CNOT3-209ENST00000617930 ASIC1P78348 528 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 PDE4DQ08499 809 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 TTI2Q6NXR4 508 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 CCDC174Q6PII3 467 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 NYAP1Q6ZVC0 841 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.59■□□□□ 0.73
CNOT3-209ENST00000617930 LARP4BQ92615 738 aaKnown RBP19.59■□□□□ 0.73
CNOT3-209ENST00000617930 KIFC2Q96AC6 838 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 DUSP9Q99956 384 aaKnown RBP19.59■□□□□ 0.73
CNOT3-209ENST00000617930 RANBP17Q9H2T7 1088 aaKnown RBP19.59■□□□□ 0.73
CNOT3-209ENST00000617930 EMILIN3Q9NT22 766 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 NKRFO15226 690 aaKnown RBP eCLIP19.59■□□□□ 0.73
CNOT3-209ENST00000617930 MTMR2Q13614 643 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 PARP14Q460N5 1801 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 KRT79Q5XKE5 535 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 DPY19L2Q6NUT2 758 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 SV2BQ7L1I2 683 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 KIAA1683Q9H0B3 1180 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 STK17AQ9UEE5 414 aa19.59■□□□□ 0.73
CNOT3-209ENST00000617930 PIK3CDO00329 1044 aa19.58■□□□□ 0.73
CNOT3-209ENST00000617930 NRDCO43847 1150 aa19.58■□□□□ 0.73
CNOT3-209ENST00000617930 CCT6AP40227 531 aaKnown RBP19.58■□□□□ 0.73
CNOT3-209ENST00000617930 PRR16Q569H4 304 aa19.58■□□□□ 0.73
CNOT3-209ENST00000617930 TCP11X2Q5H9J9 407 aa19.58■□□□□ 0.73
CNOT3-209ENST00000617930 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.58■□□□□ 0.73
CNOT3-209ENST00000617930 DYMQ7RTS9 669 aa19.58■□□□□ 0.73
CNOT3-209ENST00000617930 EEF2KMTQ96G04 330 aa19.58■□□□□ 0.73
CNOT3-209ENST00000617930 SCN4AP35499 1836 aa19.58■□□□□ 0.72
CNOT3-209ENST00000617930 SPP2Q13103 211 aa19.58■□□□□ 0.72
CNOT3-209ENST00000617930 HYIQ5T013 277 aa19.58■□□□□ 0.72
CNOT3-209ENST00000617930 MOXD1Q6UVY6 613 aa19.58■□□□□ 0.72
CNOT3-209ENST00000617930 MOB2Q70IA6 237 aa19.58■□□□□ 0.72
CNOT3-209ENST00000617930 GLIS3Q8NEA6 775 aa19.58■□□□□ 0.72
CNOT3-209ENST00000617930 CNKSR2Q8WXI2 1034 aa19.58■□□□□ 0.72
CNOT3-209ENST00000617930 FEZ1Q99689 392 aa19.58■□□□□ 0.72
CNOT3-209ENST00000617930 TAF1DQ9H5J8 278 aaPredicted RBP19.58■□□□□ 0.72
CNOT3-209ENST00000617930 WDR90Q96KV7 1748 aa19.57■□□□□ 0.72
CNOT3-209ENST00000617930 RLFQ13129 1914 aa19.57■□□□□ 0.72
CNOT3-209ENST00000617930 KCNJ18B7U540 433 aa19.57■□□□□ 0.72
CNOT3-209ENST00000617930 GRIN3BO60391 1043 aa19.57■□□□□ 0.72
CNOT3-209ENST00000617930 CBX1P83916 185 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms