RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 TRIM43Q96BQ3 446 aaPredicted RBP25.55■■□□□ 1.68
CBWD3-212ENST00000616550 SEZ6LQ9BYH1 1024 aa25.55■■□□□ 1.68
CBWD3-212ENST00000616550 TLR3O15455 904 aaKnown RBP25.54■■□□□ 1.68
CBWD3-212ENST00000616550 KPNA6O60684 536 aa25.54■■□□□ 1.68
CBWD3-212ENST00000616550 GH1P01241 217 aa25.54■■□□□ 1.68
CBWD3-212ENST00000616550 FXR1P51114 621 aaKnown RBP eCLIP25.54■■□□□ 1.68
CBWD3-212ENST00000616550 HEATR3Q7Z4Q2 680 aa25.54■■□□□ 1.68
CBWD3-212ENST00000616550 FBXL16Q8N461 479 aa25.54■■□□□ 1.68
CBWD3-212ENST00000616550 PSTPIP2Q9H939 334 aa25.54■■□□□ 1.68
CBWD3-212ENST00000616550 MRVI1Q9Y6F6 885 aa25.54■■□□□ 1.68
CBWD3-212ENST00000616550 CCDC196A0A1B0GTZ2 297 aa25.53■■□□□ 1.68
CBWD3-212ENST00000616550 PIK3CDO00329 1044 aa25.53■■□□□ 1.68
CBWD3-212ENST00000616550 KIAA0355O15063 1070 aa25.53■■□□□ 1.68
CBWD3-212ENST00000616550 RAG1P15918 1043 aa25.53■■□□□ 1.68
CBWD3-212ENST00000616550 METAP2P50579 478 aaKnown RBP eCLIP25.53■■□□□ 1.68
CBWD3-212ENST00000616550 KCNV1Q6PIU1 500 aa25.53■■□□□ 1.68
CBWD3-212ENST00000616550 USP17L6PQ6QN14 398 aa25.53■■□□□ 1.68
CBWD3-212ENST00000616550 BADQ92934 168 aa25.53■■□□□ 1.68
CBWD3-212ENST00000616550 DDX41Q9UJV9 622 aaKnown RBP25.53■■□□□ 1.68
CBWD3-212ENST00000616550 LTBP2Q14767 1821 aa25.52■■□□□ 1.68
CBWD3-212ENST00000616550 A6NJR5 290 aa25.52■■□□□ 1.68
CBWD3-212ENST00000616550 PSMC6P62333 389 aa25.52■■□□□ 1.68
CBWD3-212ENST00000616550 PURAQ00577 322 aaKnown RBP25.52■■□□□ 1.68
CBWD3-212ENST00000616550 RUFY3Q7L099 469 aa25.52■■□□□ 1.68
CBWD3-212ENST00000616550 TDHQ8IZJ6 230 aa25.52■■□□□ 1.68
CBWD3-212ENST00000616550 SLC43A3Q8NBI5 491 aa25.52■■□□□ 1.68
CBWD3-212ENST00000616550 IL31RAQ8NI17 732 aa25.52■■□□□ 1.68
CBWD3-212ENST00000616550 MTG1Q9BT17 334 aaPredicted RBP25.52■■□□□ 1.68
CBWD3-212ENST00000616550 V9GY48 417 aaPredicted RBP25.52■■□□□ 1.68
CBWD3-212ENST00000616550 CNTNAP5Q8WYK1 1306 aa25.52■■□□□ 1.68
CBWD3-212ENST00000616550 MYH7BA7E2Y1 1941 aa25.51■■□□□ 1.67
CBWD3-212ENST00000616550 MEIS2O14770 477 aa25.51■■□□□ 1.67
CBWD3-212ENST00000616550 CDC27P30260 824 aa25.51■■□□□ 1.67
CBWD3-212ENST00000616550 FAM126BQ8IXS8 530 aa25.51■■□□□ 1.67
CBWD3-212ENST00000616550 ZSWIM6Q9HCJ5 1215 aa25.51■■□□□ 1.67
CBWD3-212ENST00000616550 FAM217BQ9NTX9 383 aaPredicted RBP25.51■■□□□ 1.67
CBWD3-212ENST00000616550 CYP46A1Q9Y6A2 500 aa25.51■■□□□ 1.67
CBWD3-212ENST00000616550 GRIN2DO15399 1336 aa25.5■■□□□ 1.67
CBWD3-212ENST00000616550 STAM2O75886 525 aa25.5■■□□□ 1.67
CBWD3-212ENST00000616550 ARHGAP1Q07960 439 aa25.5■■□□□ 1.67
CBWD3-212ENST00000616550 FUT2Q10981 343 aa25.5■■□□□ 1.67
CBWD3-212ENST00000616550 AFG1LQ8WV93 481 aa25.5■■□□□ 1.67
CBWD3-212ENST00000616550 GPKOWQ92917 476 aaPredicted RBP eCLIP25.5■■□□□ 1.67
CBWD3-212ENST00000616550 AGXT2Q9BYV1 514 aa25.5■■□□□ 1.67
CBWD3-212ENST00000616550 FRMPD4Q14CM0 1322 aa25.49■■□□□ 1.67
CBWD3-212ENST00000616550 RGS20O76081 388 aa25.49■■□□□ 1.67
CBWD3-212ENST00000616550 TGFB3P10600 412 aa25.49■■□□□ 1.67
CBWD3-212ENST00000616550 ADD1P35611 737 aaKnown RBP25.49■■□□□ 1.67
CBWD3-212ENST00000616550 LAMC2Q13753 1193 aa25.49■■□□□ 1.67
CBWD3-212ENST00000616550 DHX37Q8IY37 1157 aaKnown RBP25.49■■□□□ 1.67
CBWD3-212ENST00000616550 ZFP91Q96JP5 570 aaPredicted RBP25.49■■□□□ 1.67
CBWD3-212ENST00000616550 TM6SF1Q9BZW5 370 aa25.49■■□□□ 1.67
CBWD3-212ENST00000616550 ITGB8P26012 769 aa25.48■■□□□ 1.67
CBWD3-212ENST00000616550 NAPAP54920 295 aa25.48■■□□□ 1.67
CBWD3-212ENST00000616550 GNPTABQ3T906 1256 aa25.48■■□□□ 1.67
CBWD3-212ENST00000616550 WWC2Q6AWC2 1192 aa25.48■■□□□ 1.67
CBWD3-212ENST00000616550 TBX21Q9UL17 535 aa25.48■■□□□ 1.67
CBWD3-212ENST00000616550 hCG_1984214I3L0E3 225 aa25.47■■□□□ 1.67
CBWD3-212ENST00000616550 EIF5BO60841 1220 aaKnown RBP25.47■■□□□ 1.67
CBWD3-212ENST00000616550 TIMP1P01033 207 aa25.47■■□□□ 1.67
CBWD3-212ENST00000616550 CD4P01730 458 aa25.47■■□□□ 1.67
CBWD3-212ENST00000616550 MMP3P08254 477 aa25.47■■□□□ 1.67
CBWD3-212ENST00000616550 MRPS9P82933 396 aaKnown RBP25.47■■□□□ 1.67
CBWD3-212ENST00000616550 DGKDQ16760 1214 aa25.47■■□□□ 1.67
CBWD3-212ENST00000616550 PCNX4Q63HM2 1172 aa25.47■■□□□ 1.67
CBWD3-212ENST00000616550 XRRA1Q6P2D8 792 aa25.47■■□□□ 1.67
CBWD3-212ENST00000616550 ZNF713Q8N859 430 aaPredicted RBP25.47■■□□□ 1.67
CBWD3-212ENST00000616550 EMID1Q96A84 441 aaPredicted RBP25.47■■□□□ 1.67
CBWD3-212ENST00000616550 RTEL1Q9NZ71 1219 aa25.47■■□□□ 1.67
CBWD3-212ENST00000616550 SPDYE3A6NKU9 549 aa25.46■■□□□ 1.67
CBWD3-212ENST00000616550 SLC34A2O95436 690 aa25.46■■□□□ 1.67
CBWD3-212ENST00000616550 UBE2SQ16763 222 aa25.46■■□□□ 1.67
CBWD3-212ENST00000616550 SCN10AQ9Y5Y9 1956 aa25.45■■□□□ 1.67
CBWD3-212ENST00000616550 EVCP57679 992 aa25.45■■□□□ 1.66
CBWD3-212ENST00000616550 NBPF20Q3BBV1 942 aa25.45■■□□□ 1.66
CBWD3-212ENST00000616550 CELF3Q5SZQ8 465 aaKnown RBP25.45■■□□□ 1.66
CBWD3-212ENST00000616550 PPP1R18Q6NYC8 613 aa25.45■■□□□ 1.66
CBWD3-212ENST00000616550 PPTC7Q8NI37 304 aa25.45■■□□□ 1.66
CBWD3-212ENST00000616550 ALDH8A1Q9H2A2 487 aaPredicted RBP25.45■■□□□ 1.66
CBWD3-212ENST00000616550 RANBP2P49792 3224 aaKnown RBP25.44■■□□□ 1.66
CBWD3-212ENST00000616550 NID2Q14112 1375 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 B4GALT4O60513 344 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 GGPS1O95749 300 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 PDIA3P30101 505 aaKnown RBP25.44■■□□□ 1.66
CBWD3-212ENST00000616550 ICAM3P32942 547 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 FPGSQ05932 587 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 TOB2Q14106 344 aaPredicted RBP25.44■■□□□ 1.66
CBWD3-212ENST00000616550 LRIT3Q3SXY7 679 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 FAM47CQ5HY64 1035 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 MYSM1Q5VVJ2 828 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 NFRKBQ6P4R8 1299 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 TEX2Q8IWB9 1127 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 INPP4AQ96PE3 977 aaPredicted RBP25.44■■□□□ 1.66
CBWD3-212ENST00000616550 UPF3BQ9BZI7 483 aaKnown RBP25.44■■□□□ 1.66
CBWD3-212ENST00000616550 TRPV6Q9H1D0 765 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 EHMT1Q9H9B1 1298 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 MLXIPQ9HAP2 919 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 RIC8AQ9NPQ8 531 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 BARHL2Q9NY43 387 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 PCDHA6Q9UN73 950 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms