RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 CDC6Q99741 560 aa6.12□□□□□ -1.43
NEAT1-205ENST00000616315 SPATA25Q9BR10 227 aa6.12□□□□□ -1.43
NEAT1-205ENST00000616315 AARSD1Q9BTE6 412 aaKnown RBP6.12□□□□□ -1.43
NEAT1-205ENST00000616315 GFOD1Q9NXC2 390 aa6.12□□□□□ -1.43
NEAT1-205ENST00000616315 NOP58Q9Y2X3 529 aaKnown RBP6.12□□□□□ -1.43
NEAT1-205ENST00000616315 CD2APQ9Y5K6 639 aa6.12□□□□□ -1.43
NEAT1-205ENST00000616315 K7ESM1 405 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 SHOXO15266 292 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 PPM1BO75688 479 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 ITGAVP06756 1048 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 ITGA4P13612 1032 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 ATF2P15336 505 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 VAV1P15498 845 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 CD247P20963 164 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 ANAPC15P60006 121 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 PPP2R2AP63151 447 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
NEAT1-205ENST00000616315 UBXN11Q5T124 520 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 NT5DC1Q5TFE4 455 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 ZC3H14Q6PJT7 736 aaKnown RBP6.11□□□□□ -1.43
NEAT1-205ENST00000616315 LIPIQ6XZB0 460 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 ZNF513Q8N8E2 541 aaPredicted RBP6.11□□□□□ -1.43
NEAT1-205ENST00000616315 FNIP1Q8TF40 1166 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 EXOC2Q96KP1 924 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 IPO9Q96P70 1041 aaKnown RBP6.11□□□□□ -1.43
NEAT1-205ENST00000616315 KRTAP9-8Q9BYQ0 159 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 PCDH12Q9NPG4 1184 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 SUGT1Q9Y2Z0 365 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 ZNF451Q9Y4E5 1061 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 DUSP10Q9Y6W6 482 aa6.11□□□□□ -1.43
NEAT1-205ENST00000616315 NOP56O00567 594 aaKnown RBP6.1□□□□□ -1.43
NEAT1-205ENST00000616315 AKAP8O43823 692 aaKnown RBP6.1□□□□□ -1.43
NEAT1-205ENST00000616315 PFKLP17858 780 aa6.1□□□□□ -1.43
NEAT1-205ENST00000616315 FOXO4P98177 505 aa6.1□□□□□ -1.43
NEAT1-205ENST00000616315 DALRD3Q5D0E6 543 aaKnown RBP6.1□□□□□ -1.43
NEAT1-205ENST00000616315 RTP2Q5QGT7 225 aa6.1□□□□□ -1.43
NEAT1-205ENST00000616315 FOXB2Q5VYV0 432 aa6.1□□□□□ -1.43
NEAT1-205ENST00000616315 CRTC3Q6UUV7 619 aa6.1□□□□□ -1.43
NEAT1-205ENST00000616315 CRACR2BQ8N4Y2 399 aaPredicted RBP6.1□□□□□ -1.43
NEAT1-205ENST00000616315 BVESQ8NE79 360 aa6.1□□□□□ -1.43
NEAT1-205ENST00000616315 ZNF526Q8TF50 670 aaPredicted RBP6.1□□□□□ -1.43
NEAT1-205ENST00000616315 GP6Q9HCN6 339 aa6.1□□□□□ -1.43
NEAT1-205ENST00000616315 MRPS23Q9Y3D9 190 aaKnown RBP6.1□□□□□ -1.43
NEAT1-205ENST00000616315 PCDHB12Q9Y5F1 795 aa6.1□□□□□ -1.43
NEAT1-205ENST00000616315 TRBV23-1A0A0A0MS06 115 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 FGFR1P11362 822 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 L1CAMP32004 1257 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 MASP1P48740 699 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 HTRA3P83110 453 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 NR1I3Q14994 352 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 YOD1Q5VVQ6 348 aaPredicted RBP6.09□□□□□ -1.43
NEAT1-205ENST00000616315 POMZP3Q6PJE2 187 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 ADCY4Q8NFM4 1077 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 NINJ1Q92982 152 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 KISS1RQ969F8 398 aaPredicted RBP6.09□□□□□ -1.43
NEAT1-205ENST00000616315 MFSD3Q96ES6 412 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 RCC1LQ96I51 464 aaKnown RBP6.09□□□□□ -1.43
NEAT1-205ENST00000616315 DHRS4Q9BTZ2 278 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 LGR4Q9BXB1 951 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 NCOA5Q9HCD5 579 aaKnown RBP6.09□□□□□ -1.43
NEAT1-205ENST00000616315 FBXL21Q9UKT6 434 aa6.09□□□□□ -1.43
NEAT1-205ENST00000616315 CNOT11Q9UKZ1 510 aaKnown RBP6.09□□□□□ -1.43
NEAT1-205ENST00000616315 A0A087WZG4 1122 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 PLD2O14939 933 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 RFPL3O75679 317 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 DBHP09172 617 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 TNFRSF1AP19438 455 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 ENDOUP21128 410 aaKnown RBP6.08□□□□□ -1.44
NEAT1-205ENST00000616315 SUMO1P63165 101 aaKnown RBP6.08□□□□□ -1.44
NEAT1-205ENST00000616315 DLX2Q07687 328 aaPredicted RBP6.08□□□□□ -1.44
NEAT1-205ENST00000616315 FAM209AQ5JX71 171 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 SAPCD2Q86UD0 394 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 TRIM59Q8IWR1 403 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 SCUBE1Q8IWY4 988 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 NIM1KQ8IY84 436 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 MRGPRX3Q96LB0 322 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 USP40Q9NVE5 1235 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 PRR13Q9NZ81 148 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 CGGBP1Q9UFW8 167 aaPredicted RBP6.08□□□□□ -1.44
NEAT1-205ENST00000616315 AKT3Q9Y243 479 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 EMC9Q9Y3B6 208 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 FHOD1Q9Y613 1164 aa6.08□□□□□ -1.44
NEAT1-205ENST00000616315 PRODHO43272 600 aa6.07□□□□□ -1.44
NEAT1-205ENST00000616315 TBX1O43435 398 aa6.07□□□□□ -1.44
NEAT1-205ENST00000616315 VIL1P09327 827 aaKnown RBP6.07□□□□□ -1.44
NEAT1-205ENST00000616315 PABPC1P11940 636 aaKnown RBP6.07□□□□□ -1.44
NEAT1-205ENST00000616315 MAGEA10P43363 369 aaPredicted RBP6.07□□□□□ -1.44
NEAT1-205ENST00000616315 ZNF445P59923 1031 aa6.07□□□□□ -1.44
NEAT1-205ENST00000616315 ADAM17P78536 824 aa6.07□□□□□ -1.44
NEAT1-205ENST00000616315 PABPC4Q13310 644 aaKnown RBP eCLIP6.07□□□□□ -1.44
NEAT1-205ENST00000616315 TARBP2Q15633 366 aaKnown RBP6.07□□□□□ -1.44
NEAT1-205ENST00000616315 ZNF827Q17R98 1081 aa6.07□□□□□ -1.44
NEAT1-205ENST00000616315 C21orf62-AS1Q17RA5 79 aa6.07□□□□□ -1.44
NEAT1-205ENST00000616315 FNDC3BQ53EP0 1204 aaKnown RBP6.07□□□□□ -1.44
NEAT1-205ENST00000616315 TM4SF20Q53R12 229 aa6.07□□□□□ -1.44
NEAT1-205ENST00000616315 NOL9Q5SY16 702 aaKnown RBP6.07□□□□□ -1.44
NEAT1-205ENST00000616315 ARHGEF39Q8N4T4 335 aa6.07□□□□□ -1.44
NEAT1-205ENST00000616315 DDX1Q92499 740 aaKnown RBP6.07□□□□□ -1.44
NEAT1-205ENST00000616315 MRPL4Q9BYD3 311 aaKnown RBP6.07□□□□□ -1.44
NEAT1-205ENST00000616315 PMF1-BGLAPU3KQ54 211 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms