RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MYH6P13533 1939 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 MARF1Q9Y4F3 1742 aaKnown RBP14.52□□□□□ -0.09
MSH6-214ENST00000616033 ABCC12Q96J65 1359 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 GCOM1H8Y6P7 765 aaPredicted RBP14.51□□□□□ -0.09
MSH6-214ENST00000616033 CSF1RP07333 972 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 MYZAPP0CAP1 466 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 POLR2FP61218 127 aaKnown RBP14.51□□□□□ -0.09
MSH6-214ENST00000616033 TROAPQ12815 778 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 KIAA0753Q2KHM9 967 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 TMTC3Q6ZXV5 915 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 TBC1D5Q92609 795 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 TAF4BQ92750 862 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 CYFIP2Q96F07 1278 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 SELENOSQ9BQE4 189 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 TACO1Q9BSH4 297 aaKnown RBP14.51□□□□□ -0.09
MSH6-214ENST00000616033 DDX47Q9H0S4 455 aaKnown RBP14.51□□□□□ -0.09
MSH6-214ENST00000616033 THAP9Q9H5L6 903 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 RIC1Q4ADV7 1423 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 A0A1W2PQC6 194 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 DCDC2CA8MYV0 355 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 KCNQ4P56696 695 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 ZBTB10Q96DT7 871 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 ATP6V1G3Q96LB4 118 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 NUP58Q9BVL2 599 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 EME2A4GXA9 379 aaPredicted RBP14.51□□□□□ -0.09
MSH6-214ENST00000616033 SNCBQ16143 134 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 NBPF9Q3BBW0 867 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 HIBCHQ6NVY1 386 aaPredicted RBP14.51□□□□□ -0.09
MSH6-214ENST00000616033 GJA10Q969M2 543 aa14.51□□□□□ -0.09
MSH6-214ENST00000616033 THOC1Q96FV9 657 aaKnown RBP14.51□□□□□ -0.09
MSH6-214ENST00000616033 CPSF2Q9P2I0 782 aaKnown RBP14.51□□□□□ -0.09
MSH6-214ENST00000616033 KIF1CO43896 1103 aaKnown RBP14.5□□□□□ -0.09
MSH6-214ENST00000616033 CCNE1P24864 410 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 GSCP56915 257 aaPredicted RBP14.5□□□□□ -0.09
MSH6-214ENST00000616033 MKRN4PQ13434 485 aaPredicted RBP14.5□□□□□ -0.09
MSH6-214ENST00000616033 ALX1Q15699 326 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 MEA1Q16626 185 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 KRT71Q3SY84 523 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 KLHDC7AQ5VTJ3 777 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 CDK5RAP3Q96JB5 506 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 PICK1Q9NRD5 415 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 RGPD5Q99666 1765 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 BUB1BO60566 1050 aaPredicted RBP14.5□□□□□ -0.09
MSH6-214ENST00000616033 LGR5O75473 907 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 KLRC1P26715 233 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 IFNAR2P48551 515 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 LLGL1Q15334 1064 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 KIF9Q9HAQ2 790 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 ZBTB1Q9Y2K1 713 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 DNM1LO00429 736 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 MARCH6O60337 910 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 EPS15P42566 896 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 CCNHP51946 323 aaPredicted RBP14.5□□□□□ -0.09
MSH6-214ENST00000616033 FAM133BQ5BKY9 247 aaKnown RBP14.5□□□□□ -0.09
MSH6-214ENST00000616033 MIIPQ5JXC2 388 aa14.5□□□□□ -0.09
MSH6-214ENST00000616033 MAP3K15Q6ZN16 1313 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 PPP1R12AO14974 1030 aaPredicted RBP14.49□□□□□ -0.09
MSH6-214ENST00000616033 KLRC4O43908 158 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 COPB2P35606 906 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 MAGOHP61326 146 aaKnown RBP14.49□□□□□ -0.09
MSH6-214ENST00000616033 FUT2Q10981 343 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 MSL1Q68DK7 614 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 CCDC24Q8N4L8 307 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 FAM133AQ8N9E0 248 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 MAGOHBQ96A72 148 aaKnown RBP14.49□□□□□ -0.09
MSH6-214ENST00000616033 MIEF2Q96C03 454 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 TRAF5O00463 557 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 STARD3NLO95772 234 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 EZRP15311 586 aaKnown RBP14.49□□□□□ -0.09
MSH6-214ENST00000616033 ARID4AP29374 1257 aaPredicted RBP14.49□□□□□ -0.09
MSH6-214ENST00000616033 LONP1P36776 959 aaKnown RBP14.49□□□□□ -0.09
MSH6-214ENST00000616033 FLT3P36888 993 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 PSMD2Q13200 908 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 CYB5D1Q6P9G0 228 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 GIGYF2Q6Y7W6 1299 aaKnown RBP14.49□□□□□ -0.09
MSH6-214ENST00000616033 FAM114A1Q8IWE2 563 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 PARP9Q8IXQ6 854 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 VGLL2Q8N8G2 317 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 GIMAP8Q8ND71 665 aaPredicted RBP14.49□□□□□ -0.09
MSH6-214ENST00000616033 DDX20Q9UHI6 824 aaKnown RBP14.49□□□□□ -0.09
MSH6-214ENST00000616033 CNTNAP5Q8WYK1 1306 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 PCDH11XQ9BZA7 1347 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 PCDH11YQ9BZA8 1340 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 MYH2Q9UKX2 1941 aa14.49□□□□□ -0.09
MSH6-214ENST00000616033 GNAT2P19087 354 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 VWA3BQ502W6 1294 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 BICDL1Q6ZP65 573 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 PIGBQ92521 554 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 NLRP3Q96P20 1036 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 CELF4Q9BZC1 486 aaKnown RBP14.48□□□□□ -0.09
MSH6-214ENST00000616033 TTYH3Q9C0H2 523 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 SEMA6BQ9H3T3 888 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 VCPKMTQ9H867 229 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 SH3BP1Q9Y3L3 701 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 ARFGEF2Q9Y6D5 1785 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 BICDL2A1A5D9 508 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 PDE8AO60658 829 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 SKOR1P84550 965 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 SMIM5Q71RC9 77 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 TBC1D1Q86TI0 1168 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms