RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 TRIM74Q86UV6 250 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 TRIM73Q86UV7 250 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 SPATA20Q8TB22 786 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 EZH1Q92800 747 aaPredicted RBP11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 RMND1Q9NWS8 449 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 FBXL5Q9UKA1 691 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 MYH15Q9Y2K3 1946 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 RASSF10A6NK89 507 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 DCDC2CA8MYV0 355 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 IGF2BP3O00425 579 aaKnown RBP eCLIP11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 STARD3NLO95772 234 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 MMEP08473 750 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 ARID5AQ03989 594 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 BIRC3Q13489 604 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 DDB1Q16531 1140 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 LACTB2Q53H82 288 aaPredicted RBP11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 RRAGAQ7L523 313 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 PUS3Q9BZE2 481 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 TANGO6Q9C0B7 1094 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 CEP126Q9P2H0 1117 aa11.39□□□□□ -0.59
TNFAIP3-208ENST00000615468 SH2B2O14492 632 aaPredicted RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 PPIP5K2O43314 1243 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 RAD51CO43502 376 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 RTN3O95197 1032 aaPredicted RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 RPN1P04843 607 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 GIGYF2Q6Y7W6 1299 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 HELBQ8NG08 1087 aaPredicted RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 PLBD2Q8NHP8 589 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 A8MUI8 341 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 GHRP10912 638 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 CCND1P24385 295 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 ALDH5A1P51649 535 aaPredicted RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 TRPM8Q7Z2W7 1104 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 CCDC24Q8N4L8 307 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 FBF1Q8TES7 1133 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 XPO6Q96QU8 1125 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 DPH5Q9H2P9 285 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 ECT2Q9H8V3 914 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 AATFQ9NY61 560 aaKnown RBP eCLIP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 THRAP3Q9Y2W1 955 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 ZNF142P52746 1687 aaPredicted RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 CFAP73A6NFT4 308 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 TTC36A6NLP5 189 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 LINGO3P0C6S8 592 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 STAT6P42226 847 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 ITIH3Q06033 890 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 BLMHQ13867 455 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 CCDC57Q2TAC2 916 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 LRRC24Q50LG9 513 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 CWF19L1Q69YN2 538 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 UHMK1Q8TAS1 419 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 NAF1Q96HR8 494 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 FOXP1Q9H334 677 aaPredicted RBP11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 PNMA2Q9UL42 364 aa11.38□□□□□ -0.59
TNFAIP3-208ENST00000615468 DPPA5A6NC42 116 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 CEP104O60308 925 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 NQO1P15559 274 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 DHX9Q08211 1270 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 ZNF844Q08AG5 666 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 ZNF658Q5TYW1 1059 aaPredicted RBP11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 MEX3CQ5U5Q3 659 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 PI16Q6UXB8 463 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 LONP2Q86WA8 852 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 TBC1D10CQ8IV04 446 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 MFN1Q8IWA4 741 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 CD302Q8IX05 232 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 PSMD1Q99460 953 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 GDF3Q9NR23 364 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 RGL1Q9NZL6 768 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 TRMT112Q9UI30 125 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 ZBTB1Q9Y2K1 713 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 PCDHGC5Q9Y5F6 944 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 RFX7Q2KHR2 1363 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 PALLDQ8WX93 1383 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 KCNK3O14649 394 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 ZNF263O14978 683 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 FESP07332 822 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 DRD4P21917 467 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 MGARPQ8TDB4 240 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 TLR10Q9BXR5 811 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 NSRP1Q9H0G5 558 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 CHCHD3Q9NX63 227 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 SLC12A6Q9UHW9 1150 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 ATP8A1Q9Y2Q0 1164 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 SLC4A4Q9Y6R1 1079 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 ORC4O43929 436 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 PRDM1O75626 825 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 UBOX5O94941 541 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 MCM7P33993 719 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 ROR2Q01974 943 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 PTGDRQ13258 359 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 KLHL23Q8NBE8 558 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 IFT74Q96LB3 600 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 AP1M1Q9BXS5 423 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 PLCB1Q9NQ66 1216 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 ABCF3Q9NUQ8 709 aa11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 INTS9Q9NV88 658 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-208ENST00000615468 HEG1Q9ULI3 1381 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms