RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 RRP36Q96EU6 259 aaKnown RBP6.58□□□□□ -1.36
CPNE3-208ENST00000614678 SLC26A6Q9BXS9 759 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 PDRG1Q9NUG6 133 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 SLC5A4Q9NY91 659 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 KCNJ14Q9UNX9 436 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 MAGEA10P43363 369 aaPredicted RBP6.58□□□□□ -1.36
CPNE3-208ENST00000614678 EARS2Q5JPH6 523 aaKnown RBP6.58□□□□□ -1.36
CPNE3-208ENST00000614678 PPP4R3BQ5MIZ7 849 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 ZNF467Q7Z7K2 595 aaPredicted RBP6.58□□□□□ -1.36
CPNE3-208ENST00000614678 WNT8BQ93098 351 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 WNT7AO00755 349 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 DUSP11O75319 330 aaKnown RBP6.58□□□□□ -1.36
CPNE3-208ENST00000614678 CYP2C9P11712 490 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 FAAP100Q0VG06 881 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 TKFCQ3LXA3 575 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 CCDC178Q5BJE1 867 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 ERICH6BQ5W0A0 696 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 CTAGE1Q96RT6 745 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 PPP1R12CQ9BZL4 782 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 MRPL11Q9Y3B7 192 aaKnown RBP6.58□□□□□ -1.36
CPNE3-208ENST00000614678 FDX1P10109 184 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 NEK4P51957 841 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 ARHGAP1Q07960 439 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 FSCN1Q16658 493 aaKnown RBP6.57□□□□□ -1.36
CPNE3-208ENST00000614678 FAM109BQ6ICB4 259 aaPredicted RBP6.57□□□□□ -1.36
CPNE3-208ENST00000614678 TRMT44Q8IYL2 757 aaKnown RBP6.57□□□□□ -1.36
CPNE3-208ENST00000614678 VWCEQ96DN2 955 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 PSTPIP2Q9H939 334 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 GCOM1H8Y6P7 765 aaPredicted RBP6.57□□□□□ -1.36
CPNE3-208ENST00000614678 MYL3P08590 195 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 POLR2MP0CAP2 368 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 FDPSP14324 419 aaKnown RBP6.57□□□□□ -1.36
CPNE3-208ENST00000614678 UBA1P22314 1058 aaKnown RBP6.57□□□□□ -1.36
CPNE3-208ENST00000614678 GJA9P57773 515 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 NPY5RQ15761 445 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 DUSP28Q4G0W2 176 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 VSIG10LQ86VR7 867 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 OXER1Q8TDS5 423 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 NSUN6Q8TEA1 469 aaKnown RBP6.57□□□□□ -1.36
CPNE3-208ENST00000614678 KAT2BQ92831 832 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 BADQ92934 168 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 STARD7Q9NQZ5 370 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 PDLIM7Q9NR12 457 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 DDX41Q9UJV9 622 aaKnown RBP6.57□□□□□ -1.36
CPNE3-208ENST00000614678 CYP46A1Q9Y6A2 500 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 TRIOO75962 3097 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 ASB14A6NK59 587 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 KBTBD13C9JR72 458 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 ARP10275 920 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 ACRP10323 421 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 PRPF38BQ5VTL8 546 aaKnown RBP6.57□□□□□ -1.36
CPNE3-208ENST00000614678 CYFIP1Q7L576 1253 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 TMCO2Q7Z6W1 182 aaPredicted RBP6.57□□□□□ -1.36
CPNE3-208ENST00000614678 OR6J1Q8NGC5 347 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 SCLYQ96I15 445 aa6.57□□□□□ -1.36
CPNE3-208ENST00000614678 SMCO2A6NFE2 343 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 FAM86B1E9PN63 330 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 B4GALT4O60513 344 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 FAM86B2P0C5J1 330 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 COPB2P35606 906 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 NAPAP54920 295 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 PRO3102Q9H379 93 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 SEC63Q9UGP8 760 aaKnown RBP6.56□□□□□ -1.36
CPNE3-208ENST00000614678 PHF24Q9UPV7 400 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 DDX39AO00148 427 aaKnown RBP6.56□□□□□ -1.36
CPNE3-208ENST00000614678 KIF5BP33176 963 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 CYP2C18P33260 490 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 CCL23P55773 120 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 PURAQ00577 322 aaKnown RBP6.56□□□□□ -1.36
CPNE3-208ENST00000614678 KRT32Q14532 448 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 C16orf59Q7L2K0 433 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 RNF180Q86T96 592 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 SMARCC2Q8TAQ2 1214 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 PCDHA6Q9UN73 950 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 PCDHA8Q9Y5H6 950 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 GGPS1O95749 300 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 GUCY1B3Q02153 619 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 PPP2R5BQ15173 497 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 Q7L0L9 218 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 TMTC2Q8N394 836 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 UPF3AQ9H1J1 476 aaKnown RBP6.56□□□□□ -1.36
CPNE3-208ENST00000614678 ADD3Q9UEY8 706 aaKnown RBP6.56□□□□□ -1.36
CPNE3-208ENST00000614678 MRVI1Q9Y6F6 885 aa6.56□□□□□ -1.36
CPNE3-208ENST00000614678 LTBP2Q14767 1821 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 GRXCR1A8MXD5 290 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 STXBP2Q15833 593 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 PFKFB3Q16875 520 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-208ENST00000614678 TCTN1Q2MV58 587 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 NBPF20Q3BBV1 942 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 ANKLE1Q8NAG6 615 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 ARRDC4Q8NCT1 418 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 DNERQ8NFT8 737 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 ALG1Q9BT22 464 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 BARHL2Q9NY43 387 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 SCN10AQ9Y5Y9 1956 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 RBM47A0AV96 593 aaKnown RBP6.55□□□□□ -1.36
CPNE3-208ENST00000614678 MSCO60682 206 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 MMP3P08254 477 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 SCG2P13521 617 aa6.55□□□□□ -1.36
CPNE3-208ENST00000614678 EVCP57679 992 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms