RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 PRR16Q569H4 304 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 EPHA10Q5JZY3 1008 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 PPP1R2P3Q6NXS1 205 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 OSBPL5Q9H0X9 879 aaPredicted RBP16.11■□□□□ 0.17
SNPH-203ENST00000614659 ASIC3Q9UHC3 531 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 PRPF6O94906 941 aaKnown RBP16.11■□□□□ 0.17
SNPH-203ENST00000614659 ZBED6P86452 979 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 TRIM28Q13263 835 aaKnown RBP16.11■□□□□ 0.17
SNPH-203ENST00000614659 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 ZDHHC9Q9Y397 364 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 PCDHA1Q9Y5I3 950 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 LMNTD2Q8IXW0 634 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 BBOF1Q8ND07 529 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 SLC39A2Q9NP94 309 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 CLNS1AP54105 237 aaKnown RBP16.1■□□□□ 0.17
SNPH-203ENST00000614659 CCDC105Q8IYK2 499 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
SNPH-203ENST00000614659 FDX1P10109 184 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 TBC1D9BQ66K14 1250 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 FMR1NBQ8N0W7 255 aaPredicted RBP16.1■□□□□ 0.17
SNPH-203ENST00000614659 P3H4Q92791 437 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 CCDC151A5D8V7 595 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 POLR2FP61218 127 aaKnown RBP16.1■□□□□ 0.17
SNPH-203ENST00000614659 ZSCAN26Q16670 478 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 SLFNL1Q499Z3 407 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 MIS18BP1Q6P0N0 1132 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 SLC35F6Q8N357 371 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 METTL13Q8N6R0 699 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 CCDC63Q8NA47 563 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 ZBTB9Q96C00 473 aa16.1■□□□□ 0.17
SNPH-203ENST00000614659 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
SNPH-203ENST00000614659 LARSQ9P2J5 1176 aaKnown RBP16.1■□□□□ 0.17
SNPH-203ENST00000614659 CRKP46108 304 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 LRRC63Q05C16 580 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 AOC3Q16853 763 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 TMTC3Q6ZXV5 915 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 COA7Q96BR5 231 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 HOXC10Q9NYD6 342 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 KRIT1O00522 736 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 STK10O94804 968 aaKnown RBP16.09■□□□□ 0.17
SNPH-203ENST00000614659 MAN1A1P33908 653 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 CD163L1Q9NR16 1453 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 KCNK3O14649 394 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 DYNLL1P63167 89 aaKnown RBP16.09■□□□□ 0.17
SNPH-203ENST00000614659 MRPS9P82933 396 aaKnown RBP16.09■□□□□ 0.17
SNPH-203ENST00000614659 LGSNQ5TDP6 509 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 PGBD1Q96JS3 809 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 WDR11Q9BZH6 1224 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 NACA2Q9H009 215 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 FAM204AQ9H8W3 233 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 TECPR2O15040 1411 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 EXOC3L4Q17RC7 722 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 FAM178BQ8IXR5 827 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 GABPB2Q8TAK5 448 aaPredicted RBP16.09■□□□□ 0.17
SNPH-203ENST00000614659 TYW1Q9NV66 732 aaKnown RBP16.09■□□□□ 0.17
SNPH-203ENST00000614659 FAM169AQ9Y6X4 670 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 FKBP3Q00688 224 aaKnown RBP16.09■□□□□ 0.17
SNPH-203ENST00000614659 SEPT6Q14141 434 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 SYDE2Q5VT97 1194 aa16.09■□□□□ 0.17
SNPH-203ENST00000614659 VWDEQ8N2E2 1590 aa16.08■□□□□ 0.17
SNPH-203ENST00000614659 PRKAB2O43741 272 aa16.08■□□□□ 0.17
SNPH-203ENST00000614659 GOLGA8HP0CJ92 632 aa16.08■□□□□ 0.17
SNPH-203ENST00000614659 DCAF4Q8WV16 495 aa16.08■□□□□ 0.17
SNPH-203ENST00000614659 STMN2Q93045 179 aa16.08■□□□□ 0.17
SNPH-203ENST00000614659 RNF34Q969K3 372 aa16.08■□□□□ 0.17
SNPH-203ENST00000614659 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.17
SNPH-203ENST00000614659 DEPDC5O75140 1603 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 BUB1BO60566 1050 aaPredicted RBP16.08■□□□□ 0.16
SNPH-203ENST00000614659 NOL3O60936 208 aaKnown RBP16.08■□□□□ 0.16
SNPH-203ENST00000614659 CTNNA1P35221 906 aaKnown RBP16.08■□□□□ 0.16
SNPH-203ENST00000614659 EPHB4P54760 987 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 CDC37Q16543 378 aaPredicted RBP16.08■□□□□ 0.16
SNPH-203ENST00000614659 PPP1R18Q6NYC8 613 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 MIS12Q9H081 205 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 ANAPC4Q9UJX5 808 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 RNASE9P60153 205 aaKnown RBP16.08■□□□□ 0.16
SNPH-203ENST00000614659 KRT71Q3SY84 523 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 CABS1Q96KC9 395 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 ITSN1Q15811 1721 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 STYK1Q6J9G0 422 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 SGMS1Q86VZ5 419 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 FAM114A2Q9NRY5 505 aa16.08■□□□□ 0.16
SNPH-203ENST00000614659 AFPP02771 609 aaKnown RBP16.07■□□□□ 0.16
SNPH-203ENST00000614659 NR5A1Q13285 461 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 XKR9Q5GH70 373 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 TRIM11Q96F44 468 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 CIB2O75838 187 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 TNNC2P02585 160 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 KMT5BQ4FZB7 885 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 TCP11X2Q5H9J9 407 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 CACNA2D3Q8IZS8 1091 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 PNPLA7Q6ZV29 1317 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 PDE6CP51160 858 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 DCUN1D2Q6PH85 259 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 TBC1D10CQ8IV04 446 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 ABI1Q8IZP0 508 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 TTC16Q8NEE8 873 aa16.07■□□□□ 0.16
SNPH-203ENST00000614659 CALR3Q96L12 384 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms