RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 VCPKMTQ9H867 229 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 SH2B1Q9NRF2 756 aaPredicted RBP13.44□□□□□ -0.26
SRRT-215ENST00000614484 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 GOLGA6L19H0YKK7 550 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 AOC2O75106 756 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 KRT85P78386 507 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 SSRP1Q08945 709 aaKnown RBP13.44□□□□□ -0.26
SRRT-215ENST00000614484 ZNF543Q08ER8 600 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 GPS2Q13227 327 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 HHATQ5VTY9 493 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 RASGRP4Q8TDF6 673 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 ZNF483Q8TF39 744 aaPredicted RBP13.44□□□□□ -0.26
SRRT-215ENST00000614484 PGBD1Q96JS3 809 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
SRRT-215ENST00000614484 IFT88Q13099 833 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 LONRF3Q496Y0 759 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 WDR78Q5VTH9 848 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 TMTC3Q6ZXV5 915 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 CCDC34Q96HJ3 373 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 KIF2AO00139 706 aaPredicted RBP13.43□□□□□ -0.26
SRRT-215ENST00000614484 GRIK3Q13003 919 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 TMCO3Q6UWJ1 677 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 FILIP1Q7Z7B0 1213 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 ERO1BQ86YB8 467 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 AGAP3Q96P47 875 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 ALG1Q9BT22 464 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 R3HDMLQ9H3Y0 253 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 ARGLU1Q9NWB6 273 aaPredicted RBP13.43□□□□□ -0.26
SRRT-215ENST00000614484 TMOD4Q9NZQ9 345 aa13.43□□□□□ -0.26
SRRT-215ENST00000614484 H3BQV1 296 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 KIF5BP33176 963 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 GRM4Q14833 912 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 ARHGAP29Q52LW3 1261 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 IFFO2Q5TF58 517 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 TYW1BQ6NUM6 668 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 C17orf50Q8WW18 174 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 ATG4CQ96DT6 458 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 WDR19Q8NEZ3 1342 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 PALM3A6NDB9 673 aaPredicted RBP13.42□□□□□ -0.26
SRRT-215ENST00000614484 DDAH1O94760 285 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 CDC25BP30305 580 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 HSP90B2PQ58FF3 399 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 CCDC178Q5BJE1 867 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 ARMC3Q5W041 872 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 CCAR2Q8N163 923 aaKnown RBP13.42□□□□□ -0.26
SRRT-215ENST00000614484 SNRNP27Q8WVK2 155 aaKnown RBP13.42□□□□□ -0.26
SRRT-215ENST00000614484 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 AGBL1Q96MI9 1066 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 TRIM6Q9C030 488 aaPredicted RBP13.42□□□□□ -0.26
SRRT-215ENST00000614484 JMJD4Q9H9V9 463 aa13.42□□□□□ -0.26
SRRT-215ENST00000614484 RAVER2Q9HCJ3 691 aaKnown RBP13.42□□□□□ -0.26
SRRT-215ENST00000614484 STAT2P52630 851 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 LDLRAD1Q5T700 205 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 LEKR1Q6ZMV7 388 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 FBXO18Q8NFZ0 1043 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 YIPF2Q9BWQ6 316 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 AS3MTQ9HBK9 375 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 CCL15-CCL14A0A0B4J2E2 113 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 PPP1R11O60927 126 aaPredicted RBP13.41□□□□□ -0.26
SRRT-215ENST00000614484 PPFIA4O75335 1185 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 AP1G2O75843 785 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 EVCP57679 992 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 CCL15Q16663 113 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 CPLX2Q6PUV4 134 aaKnown RBP13.41□□□□□ -0.26
SRRT-215ENST00000614484 TRIM22Q8IYM9 498 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 CACTIN-AS1Q8N1I8 211 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 DDX19AQ9NUU7 478 aaKnown RBP13.41□□□□□ -0.26
SRRT-215ENST00000614484 COL2A1P02458 1487 aaPredicted RBP13.41□□□□□ -0.26
SRRT-215ENST00000614484 FAM200BP0CF97 657 aa13.41□□□□□ -0.26
SRRT-215ENST00000614484 SNW1Q13573 536 aaKnown RBP13.41□□□□□ -0.26
SRRT-215ENST00000614484 RBM12BQ8IXT5 1001 aaKnown RBP13.41□□□□□ -0.26
SRRT-215ENST00000614484 ALDH8A1Q9H2A2 487 aaPredicted RBP13.41□□□□□ -0.26
SRRT-215ENST00000614484 TSPYL2Q9H2G4 693 aaPredicted RBP13.41□□□□□ -0.26
SRRT-215ENST00000614484 PLIN4Q96Q06 1357 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 CNTNAP5Q8WYK1 1306 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 SPDYE5A6NIY4 337 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 TMEM88BA6NKF7 163 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 SNUPNO95149 360 aaKnown RBP13.4□□□□□ -0.26
SRRT-215ENST00000614484 NR5A1Q13285 461 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 ARMC2Q8NEN0 867 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 OXER1Q8TDS5 423 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 TBC1D5Q92609 795 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 SMARCE1Q969G3 411 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 PURBQ96QR8 312 aaKnown RBP13.4□□□□□ -0.26
SRRT-215ENST00000614484 PNMA2Q9UL42 364 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 MYH4Q9Y623 1939 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 CALM1P0DP23 149 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 CALM2P0DP24 149 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 CALM3P0DP25 149 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 HOXA13P31271 388 aaPredicted RBP13.4□□□□□ -0.26
SRRT-215ENST00000614484 FUT2Q10981 343 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 PKN1Q16512 942 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 QRICH1Q2TAL8 776 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 GOLGA5Q8TBA6 731 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 ANKS1AQ92625 1134 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 C8orf76Q96K31 380 aa13.4□□□□□ -0.26
SRRT-215ENST00000614484 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
SRRT-215ENST00000614484 PTPN18Q99952 460 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms