RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 MCM10Q7L590 875 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 KIAA0232Q92628 1395 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 MIF4GDA9UHW6 222 aaKnown RBP9.48□□□□□ -0.89
TTC28-208ENST00000612946 VHLP40337 213 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 CUL4AQ13619 759 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 CD209Q9NNX6 404 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 DCDC2Q9UHG0 476 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 SNX14Q9Y5W7 946 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 PYGMP11217 842 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 CC2D2BQ6DHV5 1058 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 NEK8Q86SG6 692 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 PDE5AO76074 875 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 ARHGDIAP52565 204 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 GOLGA8FQ08AF8 430 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 GOLGA8DPQ0D2H9 430 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 STMN3Q9NZ72 180 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 MAP3K2Q9Y2U5 619 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 IGBP1P78318 339 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 GUCY1A3Q02108 690 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 DSG1Q02413 1049 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 CCDC28BQ9BUN5 200 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 BRD8Q9H0E9 1235 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 ATAD3AQ9NVI7 634 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.48□□□□□ -0.89
TTC28-208ENST00000612946 GRIN1Q05586 938 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 LSM14BQ9BX40 385 aaKnown RBP9.48□□□□□ -0.89
TTC28-208ENST00000612946 FOXP3Q9BZS1 431 aa9.48□□□□□ -0.89
TTC28-208ENST00000612946 KRT37O76014 449 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 PCGF5Q86SE9 256 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 RFWD2Q8NHY2 731 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 CLMNQ96JQ2 1002 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 AHCYL1O43865 530 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 PCP11498 1178 aaKnown RBP9.47□□□□□ -0.89
TTC28-208ENST00000612946 ATG3Q9NT62 314 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 SRGAP2BP0DMP2 458 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 THAP9Q9H5L6 903 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 RMI1Q9H9A7 625 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 ETNK1Q9HBU6 452 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 ATP8A1Q9Y2Q0 1164 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 CAB39Q9Y376 341 aaPredicted RBP9.47□□□□□ -0.89
TTC28-208ENST00000612946 ARHGEF10O15013 1369 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 COQ7Q99807 217 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 STX18Q9P2W9 335 aaKnown RBP9.47□□□□□ -0.89
TTC28-208ENST00000612946 HAUS5O94927 633 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 RIPPLY1Q0D2K3 151 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 RASGRF1Q13972 1273 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 APOBEC2Q9Y235 224 aaKnown RBP9.47□□□□□ -0.89
TTC28-208ENST00000612946 C17orf50Q8WW18 174 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 VCPKMTQ9H867 229 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 SMG5Q9UPR3 1016 aaKnown RBP9.47□□□□□ -0.89
TTC28-208ENST00000612946 PYGLP06737 847 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 KLHL23Q8NBE8 558 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 TNIP2Q8NFZ5 429 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 DDX54Q8TDD1 881 aaKnown RBP9.47□□□□□ -0.89
TTC28-208ENST00000612946 AK8Q96MA6 479 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 TRPC5Q9UL62 973 aaPredicted RBP9.47□□□□□ -0.89
TTC28-208ENST00000612946 HGSO14964 777 aaPredicted RBP9.47□□□□□ -0.89
TTC28-208ENST00000612946 HNRNPH1P31943 449 aaKnown RBP9.47□□□□□ -0.89
TTC28-208ENST00000612946 NXNQ6DKJ4 435 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 CASC4Q6P4E1 433 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 WDR75Q8IWA0 830 aaKnown RBP9.47□□□□□ -0.89
TTC28-208ENST00000612946 QKIQ96PU8 341 aaKnown RBP eCLIP9.47□□□□□ -0.898e-7■■■■□ 22.9
TTC28-208ENST00000612946 HACD3Q9P035 362 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
TTC28-208ENST00000612946 GPC4O75487 556 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 PDCLQ13371 301 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 C19orf60Q96EN9 201 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 NDUFA10O95299 355 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 KLHL38Q2WGJ6 581 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 FANCLQ9NW38 375 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 HAND2P61296 217 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 SWT1Q5T5J6 900 aaKnown RBP9.46□□□□□ -0.89
TTC28-208ENST00000612946 ZCRB1Q8TBF4 217 aaKnown RBP9.46□□□□□ -0.89
TTC28-208ENST00000612946 ALKBH8Q96BT7 664 aaKnown RBP9.46□□□□□ -0.89
TTC28-208ENST00000612946 CNPY3Q9BT09 278 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 RAD21L1Q9H4I0 556 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 IFNAR2P48551 515 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 USP14P54578 494 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 BEND3Q5T5X7 828 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 CCT8L2Q96SF2 557 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.46□□□□□ -0.89
TTC28-208ENST00000612946 CAPN11Q9UMQ6 739 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 EHHADHQ08426 723 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 BYSLQ13895 437 aaKnown RBP9.46□□□□□ -0.89
TTC28-208ENST00000612946 BEND6Q5SZJ8 279 aaPredicted RBP9.46□□□□□ -0.89
TTC28-208ENST00000612946 TMED8Q6PL24 325 aaPredicted RBP9.46□□□□□ -0.89
TTC28-208ENST00000612946 KSR2Q6VAB6 950 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 PPP4R3CPQ6ZMV5 832 aa9.46□□□□□ -0.89
TTC28-208ENST00000612946 CDH2P19022 906 aaPredicted RBP9.46□□□□□ -0.9
TTC28-208ENST00000612946 MARK3P27448 753 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 RPGRQ92834 1020 aaKnown RBP9.46□□□□□ -0.9
TTC28-208ENST00000612946 ZMYM6O95789 1325 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 SHROOM2Q13796 1616 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 GNGT2O14610 69 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 AGTP01019 485 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.9
TTC28-208ENST00000612946 TEKT4Q8WW24 435 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 GOLGA8MH3BSY2 632 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 O00370 1275 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 MFAP3LO75121 409 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms