RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PIGSQ96S52 555 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 EPC1Q9H2F5 836 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 C6orf50Q9HD87 102 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 CAPN11Q9UMQ6 739 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 TTC26A0AVF1 554 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 POTEB2H3BUK9 544 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 SEC31AO94979 1220 aaKnown RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 SNHG28P0DPA3 235 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 PLCG1P19174 1290 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 DNM2P50570 870 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 ZNF543Q08ER8 600 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 KCTD1Q719H9 257 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 NEK8Q86SG6 692 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 CABP7Q86V35 215 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 ZBED3Q96IU2 234 aaPredicted RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 TRIM47Q96LD4 638 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 NAPGQ99747 312 aaPredicted RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 C7orf25Q9BPX7 421 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 TRIM9Q9C026 710 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 NYAP2Q9P242 653 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 hCG_1984214I3L0E3 225 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 SASH3O75995 380 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 NDUFA10O95299 355 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 KIF4BQ2VIQ3 1234 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 ZNF662Q6ZS27 426 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 FAM83AQ86UY5 434 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 MICALL2Q8IY33 904 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 ZNF713Q8N859 430 aaPredicted RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 MSANTD4Q8NCY6 345 aa16.41■□□□□ 0.22
CDH1-213ENST00000612417 HNRNPLLQ8WVV9 542 aaKnown RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 DUSP9Q99956 384 aaKnown RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 CNOT7Q9UIV1 285 aaKnown RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 SCAF8Q9UPN6 1271 aaKnown RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 EPN1Q9Y6I3 576 aaPredicted RBP16.41■□□□□ 0.22
CDH1-213ENST00000612417 BICDL2A1A5D9 508 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 SMCO2A6NFE2 343 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 FZD9O00144 591 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 CCNE1P24864 410 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 TNNI2P48788 182 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 MMP14P50281 582 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 ZNF280AP59817 542 aaPredicted RBP16.4■□□□□ 0.22
CDH1-213ENST00000612417 RRP1BQ14684 758 aaKnown RBP16.4■□□□□ 0.22
CDH1-213ENST00000612417 MEA1Q16626 185 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 WHAMMP3Q1A5X7 153 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 MIGA2Q7L4E1 593 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 RETREG2Q8NC44 543 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 MKL1Q969V6 931 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 MAGEC2Q9UBF1 373 aaPredicted RBP16.4■□□□□ 0.22
CDH1-213ENST00000612417 RAB21Q9UL25 225 aa16.4■□□□□ 0.22
CDH1-213ENST00000612417 CCNT1O60563 726 aaKnown RBP16.39■□□□□ 0.21
CDH1-213ENST00000612417 TBC1D10BQ4KMP7 808 aaPredicted RBP16.39■□□□□ 0.21
CDH1-213ENST00000612417 GPATCH4Q5T3I0 446 aaKnown RBP16.39■□□□□ 0.21
CDH1-213ENST00000612417 SLFN13Q68D06 897 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 TTBK2Q6IQ55 1244 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 SAMD7Q7Z3H4 446 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 CHP1Q99653 195 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 SLF1Q9BQI6 1058 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 FHDC1Q9C0D6 1143 aaPredicted RBP16.39■□□□□ 0.21
CDH1-213ENST00000612417 TTYH3Q9C0H2 523 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 REXO2Q9Y3B8 237 aaKnown RBP16.39■□□□□ 0.21
CDH1-213ENST00000612417 ABL1P00519 1130 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 EGFRP00533 1210 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 SLC16A2P36021 539 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 SLC1A4P43007 532 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 JAG1P78504 1218 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 AMPD2Q01433 879 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 LETM2Q2VYF4 491 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 FAM114A1Q8IWE2 563 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 CDAN1Q8IWY9 1227 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 P2RX5Q93086 422 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 NUP58Q9BVL2 599 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 FUT8Q9BYC5 575 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 HAUS4Q9H6D7 363 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 ANKZF1Q9H8Y5 726 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 EXOC1Q9NV70 894 aa16.39■□□□□ 0.21
CDH1-213ENST00000612417 AMPD3Q01432 767 aa16.38■□□□□ 0.21
CDH1-213ENST00000612417 WDR59Q6PJI9 974 aa16.38■□□□□ 0.21
CDH1-213ENST00000612417 SIAH1Q8IUQ4 282 aa16.38■□□□□ 0.21
CDH1-213ENST00000612417 ADGRF4Q8IZF3 695 aa16.38■□□□□ 0.21
CDH1-213ENST00000612417 CSGALNACT2Q8N6G5 542 aa16.38■□□□□ 0.21
CDH1-213ENST00000612417 PLIN2Q99541 437 aa16.38■□□□□ 0.21
CDH1-213ENST00000612417 TUBGCP2Q9BSJ2 902 aa16.38■□□□□ 0.21
CDH1-213ENST00000612417 MMTAG2Q9BU76 263 aaKnown RBP16.38■□□□□ 0.21
CDH1-213ENST00000612417 ZNF541Q9H0D2 1346 aa16.38■□□□□ 0.21
CDH1-213ENST00000612417 RASA3Q14644 834 aa16.38■□□□□ 0.21
CDH1-213ENST00000612417 REXO1Q8N1G1 1221 aaKnown RBP16.38■□□□□ 0.21
CDH1-213ENST00000612417 DCAF4Q8WV16 495 aa16.38■□□□□ 0.21
CDH1-213ENST00000612417 F5H6K3 240 aa16.37■□□□□ 0.21
CDH1-213ENST00000612417 KLRC3Q07444 240 aa16.37■□□□□ 0.21
CDH1-213ENST00000612417 PDE4DQ08499 809 aa16.37■□□□□ 0.21
CDH1-213ENST00000612417 LONRF2Q1L5Z9 754 aa16.37■□□□□ 0.21
CDH1-213ENST00000612417 TSR1Q2NL82 804 aaKnown RBP16.37■□□□□ 0.21
CDH1-213ENST00000612417 FIGNQ5HY92 759 aa16.37■□□□□ 0.21
CDH1-213ENST00000612417 MSL3Q8N5Y2 521 aaKnown RBP16.37■□□□□ 0.21
CDH1-213ENST00000612417 TBCKQ8TEA7 893 aa16.37■□□□□ 0.21
CDH1-213ENST00000612417 JMJD4Q9H9V9 463 aa16.37■□□□□ 0.21
CDH1-213ENST00000612417 PUF60Q9UHX1 559 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms