RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, human

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11B-205	ENST00000611150	SRPK1	Q96SB4	655 aa	Known RBP	18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	HINFP	Q9BQA5	517 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	STIM2	Q9P246	746 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	DKK3	Q9UBP4	350 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	DMGDH	Q9UI17	866 aa	Known RBP	18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	TUBE1	Q9UJT0	475 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	LRCH1	Q9Y2L9	728 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150		A8MUI8	341 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	KRT16	P08779	473 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	NCALD	P61601	193 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	CAMK2B	Q13554	666 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	TWISTNB	Q3B726	338 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	CNGA4	Q8IV77	575 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	MREG	Q8N565	214 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	LRRC1	Q9BTT6	524 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	HSFX1	Q9UBD0	423 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	GUCA1B	Q9UMX6	200 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	AGAP1	Q9UPQ3	857 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	MAGEA13P	A6NCF6	341 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150		F8W031	263 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	KCNA3	P22001	575 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	HPCA	P84074	193 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	ITIH3	Q06033	890 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	RBL2	Q08999	1139 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	FXN	Q16595	210 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	CCDC153	Q494R4	210 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	18.81	■□□□□ 0.6	8e-6	■■■■■ 36.8
CDK11B-205	ENST00000611150	RAB17	Q9H0T7	212 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	ECT2	Q9H8V3	914 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	RNPEPL1	Q9HAU8	725 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	TMBIM4	Q9HC24	238 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	ARHGEF38	Q9NXL2	777 aa		18.81	■□□□□ 0.6
CDK11B-205	ENST00000611150	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	ELL2	O00472	640 aa	Predicted RBP	18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	ASAP2	O43150	1006 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	MYZAP	P0CAP1	466 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	PRKAR2B	P31323	418 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	MUM1	Q2TAK8	710 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	OLFML2B	Q68BL8	750 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	RAB11FIP4	Q86YS3	637 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	ARHGEF3	Q9NR81	526 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	ETNK2	Q9NVF9	386 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	LARS	Q9P2J5	1176 aa	Known RBP	18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	TTLL3	Q9Y4R7	772 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	OVOS2	A0A0G2JMS6	1433 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	OVOS2	A0A0J9YW53	1432 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	OVOS2	Q6IE36	1432 aa		18.8	■□□□□ 0.6
CDK11B-205	ENST00000611150	ADAR	P55265	1226 aa	Known RBP	18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	BIRC3	Q13489	604 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	KRT24	Q2M2I5	525 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	ODF2	Q5BJF6	829 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	C14orf80	Q86SX3	495 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	CCNJL	Q8IV13	435 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	RUFY2	Q8WXA3	655 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	MEIS3	Q99687	375 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	CCDC28B	Q9BUN5	200 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	AMOTL2	Q9Y2J4	779 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	PTPRU	Q92729	1446 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	BACH1	O14867	736 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	MFAP3L	O75121	409 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	RARA	P10276	462 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	TMOD1	P28289	359 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	CCNF	P41002	786 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	PPP2R2A	P63151	447 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	PTK7	Q13308	1070 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	NR1I3	Q14994	352 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	BCL2A1	Q16548	175 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	ZNF362	Q5T0B9	420 aa	Predicted RBP	18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	SYDE2	Q5VT97	1194 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	UCMA	Q8WVF2	138 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	CGREF1	Q99674	301 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	SLC39A3	Q9BRY0	314 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	NACAP1	Q9BZK3	213 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	MRPL46	Q9H2W6	279 aa	Known RBP	18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	HAUS4	Q9H6D7	363 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	TBCCD1	Q9NVR7	557 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	WWC3	Q9ULE0	1092 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	LUC7L2	Q9Y383	392 aa	Known RBP	18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	ZNF711	Q9Y462	761 aa		18.79	■□□□□ 0.6
CDK11B-205	ENST00000611150	ALDH1L1	O75891	902 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	GNAT2	P19087	354 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	S100A1	P23297	94 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	STK3	Q13188	491 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	LRRC49	Q8IUZ0	686 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	CNTROB	Q8N137	903 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	SYT2	Q8N9I0	419 aa	Predicted RBP	18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	RBBP8NL	Q8NC74	664 aa	Predicted RBP	18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	CPLX3	Q8WVH0	158 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	IFT81	Q8WYA0	676 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	DRC3	Q9H069	523 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	SAMD15	Q9P1V8	674 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	MGEA5	O60502	916 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	JAK2	O60674	1132 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	CHGB	P05060	677 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	ALDH2	P05091	517 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	SKI	P12755	728 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	FECH	P22830	423 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	SLC7A5P1	Q8MH63	180 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms