RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 FAM177A1Q8N128 213 aaPredicted RBP6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 NAT16Q8N8M0 369 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 APPBP2Q92624 585 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 PTCHD1Q96NR3 888 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 IPO9Q96P70 1041 aaKnown RBP6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 FANCLQ9NW38 375 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 TMEM260Q9NX78 707 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 ACSL6Q9UKU0 697 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 PALD1Q9ULE6 856 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 TAF6LQ9Y6J9 622 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 OVOL3O00110 214 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 ENPP3O14638 875 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 PRODHO43272 600 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 CDC45O75419 566 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 TBC1D8O95759 1140 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 MPOP05164 745 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 FGFR1P11362 822 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 GRIA2P42262 883 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 MAGEA10P43363 369 aaPredicted RBP6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 CAP1Q01518 475 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 VWA3BQ502W6 1294 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 UBXN11Q5T124 520 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 YOD1Q5VVQ6 348 aaPredicted RBP6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 FOXB2Q5VYV0 432 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 NSMFQ6X4W1 530 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 MCMBPQ9BTE3 642 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 IER2Q9BTL4 223 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 NKX2-4Q9H2Z4 354 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 TNFRSF12AQ9NP84 129 aa6.29□□□□□ -1.4
SMCHD1-213ENST00000609587 TRBV23-1A0A0A0MS06 115 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 NUDT19A8MXV4 375 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 STXBP3O00186 592 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 CLSTN1O94985 981 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 CAPNS1P04632 268 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 SNRPB2P08579 225 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 PABPC1P11940 636 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 HSD3B2P26439 372 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 HOXC12P31275 282 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 L1CAMP32004 1257 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 KCNJ6P48051 423 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 ADAM17P78536 824 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 LAPTM5Q13571 262 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 RAB3GAP1Q15042 981 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 FAM209AQ5JX71 171 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 FERMT3Q86UX7 667 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 SCUBE1Q8IWY4 988 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 ADGRG2Q8IZP9 1017 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 NLGN2Q8NFZ4 835 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 EXOC2Q96KP1 924 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 CCDC140Q96MF4 163 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 JMJD8Q96S16 334 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 CYP26B1Q9NR63 512 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 BACE2Q9Y5Z0 518 aa6.28□□□□□ -1.4
SMCHD1-213ENST00000609587 CCDC163A0A0D9SF12 145 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 A0A1B0GTL3 188 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 CANXP27824 592 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 ECI1P42126 302 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 GFRA1P56159 465 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 SCRN1Q12765 414 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 SF1Q15637 639 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 PLEKHN1Q494U1 663 aaPredicted RBP6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 RPTNQ6XPR3 784 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 C16orf86Q6ZW13 317 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 SLC16A11Q8NCK7 471 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 KCTD13Q8WZ19 329 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 OSBP2Q969R2 916 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 DHRS4Q9BTZ2 278 aa6.27□□□□□ -1.41
SMCHD1-213ENST00000609587 C2orf71A6NGG8 1288 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 DLX3O60479 287 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 CPP00450 1065 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 PRKCAP17252 672 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 ARL4AP40617 200 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 SEPHS1P49903 392 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 CORO7P57737 925 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 CYP4F8P98187 520 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 MAP4K2Q12851 820 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 PLEKHG4Q58EX7 1191 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 NT5DC1Q5TFE4 455 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 EGFLAMQ63HQ2 1017 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 LIPIQ6XZB0 460 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 JAMLQ86YT9 394 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 COPS5Q92905 334 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 KISS1RQ969F8 398 aaPredicted RBP6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 SPATA25Q9BR10 227 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 USP40Q9NVE5 1235 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 IMPACTQ9P2X3 320 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 SRRDQ9UH36 339 aa6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 MRPS23Q9Y3D9 190 aaKnown RBP6.26□□□□□ -1.41
SMCHD1-213ENST00000609587 IRS2Q9Y4H2 1338 aa6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 TRBV23OR9-2A0A075B6M9 112 aa6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 ASMTLO95671 621 aa6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 SCG5P05408 212 aa6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 SUMO1P63165 101 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 ZNF200P98182 395 aaPredicted RBP6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 MVKQ03426 396 aa6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 TMEM62Q0P6H9 643 aa6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 TCEA2Q15560 299 aa6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 SYNPOQ8N3V7 929 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms