RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 MOXD2PA6NHM9 499 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 B4DLN1 442 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 CTAGE5O15320 804 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 PLEKHA8P1O95397 391 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 C6orf222P0C671 652 aaPredicted RBP11.55□□□□□ -0.56
CTSA-215ENST00000607187 SMPD1P17405 629 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 RXRAP19793 462 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
CTSA-215ENST00000607187 KCNA10Q16322 511 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 C1orf53Q5VUE5 145 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 SRBD1Q8N5C6 995 aaKnown RBP11.55□□□□□ -0.56
CTSA-215ENST00000607187 SAMD3Q8N6K7 520 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 FANCBQ8NB91 859 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 PCSK9Q8NBP7 692 aaKnown RBP11.55□□□□□ -0.56
CTSA-215ENST00000607187 NSUN6Q8TEA1 469 aaKnown RBP11.55□□□□□ -0.56
CTSA-215ENST00000607187 FERMT2Q96AC1 680 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 TAAR1Q96RJ0 339 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 RMDN3Q96TC7 470 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 PRO3102Q9H379 93 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 SPC25Q9HBM1 224 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 COLQQ9Y215 455 aaPredicted RBP11.55□□□□□ -0.56
CTSA-215ENST00000607187 Q9Y3F1 56 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 SNX14Q9Y5W7 946 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 MAP3K7O43318 606 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 CFBP00751 764 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 ACLYP53396 1101 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 RTP1P59025 263 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 DUSP28Q4G0W2 176 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 GNASQ5JWF2 1037 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 TMEM63BQ5T3F8 832 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 APOA5Q6Q788 366 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 SYNE3Q6ZMZ3 975 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
CTSA-215ENST00000607187 TLK2Q86UE8 772 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 MICU3Q86XE3 530 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 CMTR1Q8N1G2 835 aaKnown RBP11.54□□□□□ -0.56
CTSA-215ENST00000607187 PIBF1Q8WXW3 757 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 RRP36Q96EU6 259 aaKnown RBP11.54□□□□□ -0.56
CTSA-215ENST00000607187 JAKMIP1Q96N16 626 aaKnown RBP11.54□□□□□ -0.56
CTSA-215ENST00000607187 IWS1Q96ST2 819 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 USP26Q9BXU7 913 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 WDR11Q9BZH6 1224 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 FAM217BQ9NTX9 383 aaPredicted RBP11.54□□□□□ -0.56
CTSA-215ENST00000607187 BRPF3Q9ULD4 1205 aa11.54□□□□□ -0.56
CTSA-215ENST00000607187 ZMYND8Q9ULU4 1186 aaPredicted RBP11.54□□□□□ -0.56
CTSA-215ENST00000607187 LTBP2Q14767 1821 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 DYNC1LI2O43237 492 aaPredicted RBP11.53□□□□□ -0.56
CTSA-215ENST00000607187 ASGR1P07306 291 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 SYN1P17600 705 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 PTGS1P23219 599 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 RCAN1P53805 252 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 FSCN1Q16658 493 aaKnown RBP11.53□□□□□ -0.56
CTSA-215ENST00000607187 ARHGEF16Q5VV41 709 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 BLOC1S2Q6QNY1 142 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 TMTC3Q6ZXV5 915 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 RAB11FIP4Q86YS3 637 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 FBXL16Q8N461 479 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 SCFD2Q8WU76 684 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 PTCD2Q8WV60 388 aaKnown RBP11.53□□□□□ -0.56
CTSA-215ENST00000607187 EPAS1Q99814 870 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 PXMP2Q9NR77 195 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 SEC63Q9UGP8 760 aaKnown RBP11.53□□□□□ -0.56
CTSA-215ENST00000607187 ELP1O95163 1332 aa11.53□□□□□ -0.56
CTSA-215ENST00000607187 GCOM1H8Y6P7 765 aaPredicted RBP11.52□□□□□ -0.57
CTSA-215ENST00000607187 ZBTB43O43298 467 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 POLR2MP0CAP2 368 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 CPA1P15085 419 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 PSMA5P28066 241 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 HOXA13P31271 388 aaPredicted RBP11.52□□□□□ -0.57
CTSA-215ENST00000607187 BEX3Q00994 111 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 STXBP2Q15833 593 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 TRIM60Q495X7 471 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 HABP4Q5JVS0 413 aaKnown RBP11.52□□□□□ -0.57
CTSA-215ENST00000607187 Q6ZUG5 572 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 GLT1D1Q96MS3 346 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 GDF15Q99988 308 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 AP5M1Q9H0R1 490 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 STARD7Q9NQZ5 370 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 RBM28Q9NW13 759 aaKnown RBP11.52□□□□□ -0.57
CTSA-215ENST00000607187 RBM27Q9P2N5 1060 aaKnown RBP11.52□□□□□ -0.57
CTSA-215ENST00000607187 ATP11BQ9Y2G3 1177 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 SCN10AQ9Y5Y9 1956 aa11.52□□□□□ -0.57
CTSA-215ENST00000607187 KLF18A0A0U1RQI7 1052 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 NKRFO15226 690 aaKnown RBP eCLIP11.51□□□□□ -0.57
CTSA-215ENST00000607187 EIF3JO75822 258 aaKnown RBP11.51□□□□□ -0.57
CTSA-215ENST00000607187 ARIH2O95376 493 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 NR3C2P08235 984 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 EIF2AK2P19525 551 aaKnown RBP11.51□□□□□ -0.57
CTSA-215ENST00000607187 CASTP20810 708 aaKnown RBP11.51□□□□□ -0.57
CTSA-215ENST00000607187 RPS6KB1P23443 525 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 BMP8BP34820 402 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 FGD1P98174 961 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 TLE2Q04725 743 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 FUT2Q10981 343 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 TTLL4Q14679 1199 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 PPP2R5BQ15173 497 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 RTN1Q16799 776 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 MYSM1Q5VVJ2 828 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 CCDC62Q6P9F0 684 aa11.51□□□□□ -0.57
CTSA-215ENST00000607187 ANKRD33Q7Z3H0 272 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms