RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 CMTR1Q8N1G2 835 aaKnown RBP22.12■■□□□ 1.13
SRSF4-206ENST00000605204 CCDC82Q8N4S0 544 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 SMARCC2Q8TAQ2 1214 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 TOX2Q96NM4 488 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 GLT8D2Q9H1C3 349 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 PSTPIP2Q9H939 334 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 ATP11BQ9Y2G3 1177 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 CDH23Q9H251 3354 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 KPNA6O60684 536 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 PGM5Q15124 567 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 GPR153Q6NV75 609 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 ANKRD33Q7Z3H0 272 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 HEATR3Q7Z4Q2 680 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 VSIG10LQ86VR7 867 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 FCHSD1Q86WN1 690 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 POLR3EQ9NVU0 708 aa22.12■■□□□ 1.13
SRSF4-206ENST00000605204 A0A0U1RQG5 324 aaPredicted RBP22.11■■□□□ 1.13
SRSF4-206ENST00000605204 TRIM60Q495X7 471 aa22.11■■□□□ 1.13
SRSF4-206ENST00000605204 CCDC62Q6P9F0 684 aa22.11■■□□□ 1.13
SRSF4-206ENST00000605204 OR6J1Q8NGC5 347 aa22.11■■□□□ 1.13
SRSF4-206ENST00000605204 TGFB3P10600 412 aa22.1■■□□□ 1.13
SRSF4-206ENST00000605204 GNPTABQ3T906 1256 aa22.1■■□□□ 1.13
SRSF4-206ENST00000605204 IL17RAQ96F46 866 aa22.1■■□□□ 1.13
SRSF4-206ENST00000605204 EHMT1Q9H9B1 1298 aa22.1■■□□□ 1.13
SRSF4-206ENST00000605204 FAM217BQ9NTX9 383 aaPredicted RBP22.1■■□□□ 1.13
SRSF4-206ENST00000605204 MTMR10Q9NXD2 777 aa22.1■■□□□ 1.13
SRSF4-206ENST00000605204 MRVI1Q9Y6F6 885 aa22.1■■□□□ 1.13
SRSF4-206ENST00000605204 DCDC2CA8MYV0 355 aa22.09■■□□□ 1.13
SRSF4-206ENST00000605204 MEIS2O14770 477 aa22.09■■□□□ 1.13
SRSF4-206ENST00000605204 GH1P01241 217 aa22.09■■□□□ 1.13
SRSF4-206ENST00000605204 CDC27P30260 824 aa22.09■■□□□ 1.13
SRSF4-206ENST00000605204 BEX3Q00994 111 aa22.09■■□□□ 1.13
SRSF4-206ENST00000605204 SEPT14Q6ZU15 432 aa22.09■■□□□ 1.13
SRSF4-206ENST00000605204 EMID1Q96A84 441 aaPredicted RBP22.09■■□□□ 1.13
SRSF4-206ENST00000605204 V9GY48 417 aaPredicted RBP22.09■■□□□ 1.13
SRSF4-206ENST00000605204 A6NJR5 290 aa22.08■■□□□ 1.12
SRSF4-206ENST00000605204 DLL1O00548 723 aa22.08■■□□□ 1.12
SRSF4-206ENST00000605204 MYCLP12524 364 aaPredicted RBP22.08■■□□□ 1.12
SRSF4-206ENST00000605204 NAPAP54920 295 aa22.08■■□□□ 1.12
SRSF4-206ENST00000605204 CCDC12Q8WUD4 166 aaPredicted RBP22.08■■□□□ 1.12
SRSF4-206ENST00000605204 VTI1AQ96AJ9 217 aa22.08■■□□□ 1.12
SRSF4-206ENST00000605204 ZNF274Q96GC6 653 aaPredicted RBP22.08■■□□□ 1.12
SRSF4-206ENST00000605204 LBHD1Q9BQE6 289 aaPredicted RBP22.08■■□□□ 1.12
SRSF4-206ENST00000605204 UPF3BQ9BZI7 483 aaKnown RBP22.08■■□□□ 1.12
SRSF4-206ENST00000605204 BARHL2Q9NY43 387 aa22.08■■□□□ 1.12
SRSF4-206ENST00000605204 SPDYE3A6NKU9 549 aa22.07■■□□□ 1.12
SRSF4-206ENST00000605204 ARVCFO00192 962 aa22.07■■□□□ 1.12
SRSF4-206ENST00000605204 CLTBP09497 229 aa22.07■■□□□ 1.12
SRSF4-206ENST00000605204 PDIA3P30101 505 aaKnown RBP22.07■■□□□ 1.12
SRSF4-206ENST00000605204 ADD1P35611 737 aaKnown RBP22.07■■□□□ 1.12
SRSF4-206ENST00000605204 AKAP17AQ02040 695 aaKnown RBP22.07■■□□□ 1.12
SRSF4-206ENST00000605204 TLE2Q04725 743 aa22.07■■□□□ 1.12
SRSF4-206ENST00000605204 TOB2Q14106 344 aaPredicted RBP22.07■■□□□ 1.12
SRSF4-206ENST00000605204 ANKRD1Q15327 319 aa22.07■■□□□ 1.12
SRSF4-206ENST00000605204 PCNX4Q63HM2 1172 aa22.07■■□□□ 1.12
SRSF4-206ENST00000605204 WWC2Q6AWC2 1192 aa22.07■■□□□ 1.12
SRSF4-206ENST00000605204 CXCL17Q6UXB2 119 aa22.07■■□□□ 1.12
SRSF4-206ENST00000605204 RNF26Q9BY78 433 aaPredicted RBP22.07■■□□□ 1.12
SRSF4-206ENST00000605204 PDRG1Q9NUG6 133 aa22.07■■□□□ 1.12
SRSF4-206ENST00000605204 DDX41Q9UJV9 622 aaKnown RBP22.07■■□□□ 1.12
SRSF4-206ENST00000605204 hCG_1642624A0A1W2PR95 340 aa22.06■■□□□ 1.12
SRSF4-206ENST00000605204 TLR3O15455 904 aaKnown RBP22.06■■□□□ 1.12
SRSF4-206ENST00000605204 ARIH2O95376 493 aa22.06■■□□□ 1.12
SRSF4-206ENST00000605204 FOSP01100 380 aaPredicted RBP22.06■■□□□ 1.12
SRSF4-206ENST00000605204 IRX5P78411 483 aaPredicted RBP22.06■■□□□ 1.12
SRSF4-206ENST00000605204 LAMC2Q13753 1193 aa22.06■■□□□ 1.12
SRSF4-206ENST00000605204 PFKFB3Q16875 520 aaPredicted RBP22.06■■□□□ 1.12
SRSF4-206ENST00000605204 MCTP2Q6DN12 878 aa22.06■■□□□ 1.12
SRSF4-206ENST00000605204 CPLX2Q6PUV4 134 aaKnown RBP22.06■■□□□ 1.12
SRSF4-206ENST00000605204 USP17L6PQ6QN14 398 aa22.06■■□□□ 1.12
SRSF4-206ENST00000605204 GPKOWQ92917 476 aaPredicted RBP eCLIP22.06■■□□□ 1.122e-6■■■□□ 14.6
SRSF4-206ENST00000605204 INPP4AQ96PE3 977 aaPredicted RBP22.06■■□□□ 1.12
SRSF4-206ENST00000605204 MTG1Q9BT17 334 aaPredicted RBP22.06■■□□□ 1.12
SRSF4-206ENST00000605204 ALDH8A1Q9H2A2 487 aaPredicted RBP22.06■■□□□ 1.12
SRSF4-206ENST00000605204 PDLIM7Q9NR12 457 aa22.06■■□□□ 1.12
SRSF4-206ENST00000605204 STXBP5LQ9Y2K9 1186 aa22.06■■□□□ 1.12
SRSF4-206ENST00000605204 PRUNE2Q8WUY3 3088 aa22.05■■□□□ 1.12
SRSF4-206ENST00000605204 PRPF3O43395 683 aaKnown RBP22.05■■□□□ 1.12
SRSF4-206ENST00000605204 PQBP1O60828 265 aaKnown RBP22.05■■□□□ 1.12
SRSF4-206ENST00000605204 SCG2P13521 617 aa22.05■■□□□ 1.12
SRSF4-206ENST00000605204 IFNAR1P17181 557 aa22.05■■□□□ 1.12
SRSF4-206ENST00000605204 CDK7P50613 346 aa22.05■■□□□ 1.12
SRSF4-206ENST00000605204 PURAQ00577 322 aaKnown RBP22.05■■□□□ 1.12
SRSF4-206ENST00000605204 TMEM63BQ5T3F8 832 aa22.05■■□□□ 1.12
SRSF4-206ENST00000605204 SLC43A3Q8NBI5 491 aa22.05■■□□□ 1.12
SRSF4-206ENST00000605204 IL31RAQ8NI17 732 aa22.05■■□□□ 1.12
SRSF4-206ENST00000605204 CDHR1Q96JP9 859 aa22.05■■□□□ 1.12
SRSF4-206ENST00000605204 RIC8AQ9NPQ8 531 aa22.05■■□□□ 1.12
SRSF4-206ENST00000605204 ESYT2A0FGR8 921 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 STXBP3O00186 592 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 FIBPO43427 364 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 ICAM3P32942 547 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 ADCY7P51828 1080 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 ARHGAP1Q07960 439 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 AP3B2Q13367 1082 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 ITGA7Q13683 1181 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 TRIM22Q8IYM9 498 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 PPTC7Q8NI37 304 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 GUCD1Q96NT3 240 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 PRDM5Q9NQX1 630 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms