RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 GTF2IRD1Q9UHL9 959 aa13.89□□□□□ -0.19
PDLIM1P1-201ENST00000604187 CTNNA3Q9UI47 895 aa13.89□□□□□ -0.19
PDLIM1P1-201ENST00000604187 DDX19BQ9UMR2 479 aa13.89□□□□□ -0.19
PDLIM1P1-201ENST00000604187 INSL6Q9Y581 213 aa13.89□□□□□ -0.19
PDLIM1P1-201ENST00000604187 CTDSPL2Q05D32 466 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 MBTPS1Q14703 1052 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 TCEAL5Q5H9L2 206 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 TRAF7Q6Q0C0 670 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 BTNL9Q6UXG8 535 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 CHST3Q7LGC8 479 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 MYOCDQ8IZQ8 938 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 BANK1Q8NDB2 785 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 DNERQ8NFT8 737 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 GPATCH3Q96I76 525 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 GPCPD1Q9NPB8 672 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 HDAC6Q9UBN7 1215 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 FAM50BQ9Y247 325 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 ZFHX2Q9C0A1 2572 aaPredicted RBP13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 SCN5AQ14524 2016 aa13.88□□□□□ -0.19
PDLIM1P1-201ENST00000604187 TANC1Q9C0D5 1861 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 B4DLN1 442 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 RANBP6O60518 1105 aaKnown RBP13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 LGR5O75473 907 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 GH1P01241 217 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 AMHP03971 560 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 MRPL12P52815 198 aaKnown RBP13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 LY6KQ17RY6 165 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 TRIM71Q2Q1W2 868 aaKnown RBP13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 EPC2Q52LR7 807 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 ZNF618Q5T7W0 954 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 CCDC62Q6P9F0 684 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 ADHFE1Q8IWW8 467 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 WNT8BQ93098 351 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 PABPC5Q96DU9 382 aaKnown RBP13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 MFSD14AQ96MC6 490 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 PHOX2BQ99453 314 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 PRKAG3Q9UGI9 489 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 SCN10AQ9Y5Y9 1956 aa13.87□□□□□ -0.19
PDLIM1P1-201ENST00000604187 C19orf67A6NJJ6 358 aa13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 MS4A1P11836 297 aa13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 CASTP20810 708 aaKnown RBP13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 NOVP48745 357 aa13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 HTRA4P83105 476 aaPredicted RBP13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 PTK7Q13308 1070 aa13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 COL19A1Q14993 1142 aa13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 SEPT14Q6ZU15 432 aa13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 ALG1Q9BT22 464 aa13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 CLDND1Q9NY35 253 aa13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 PNMA2Q9UL42 364 aa13.86□□□□□ -0.19
PDLIM1P1-201ENST00000604187 TRIOO75962 3097 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 ZNF286BP0CG31 522 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 IRS1P35568 1242 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 PSEN2P49810 448 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 GPM6BQ13491 265 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 MFSD10Q14728 455 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 DGKDQ16760 1214 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 SAMD11Q96NU1 681 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 YME1L1Q96TA2 773 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 UPF3BQ9BZI7 483 aaKnown RBP13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 NSUN3Q9H649 340 aaKnown RBP13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 MUTYHQ9UIF7 546 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
PDLIM1P1-201ENST00000604187 CACNA1AO00555 2505 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 H3BNC9 293 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 FOXP2O15409 715 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 F2P00734 622 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 TOP1P11387 765 aaKnown RBP13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 ZNF200P98182 395 aaPredicted RBP13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 CLUL1Q15846 466 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 KIAA0753Q2KHM9 967 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 USH1GQ495M9 461 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 FBXO11Q86XK2 927 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 DBF4BQ8NFT6 615 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 TMEM47Q9BQJ4 181 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 FSD1Q9BTV5 496 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 KATNAL1Q9BW62 490 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 EMSYQ7Z589 1322 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 TET1Q8NFU7 2136 aa13.84□□□□□ -0.19
PDLIM1P1-201ENST00000604187 ORC4O43929 436 aa13.83□□□□□ -0.2
PDLIM1P1-201ENST00000604187 THPOP40225 353 aa13.83□□□□□ -0.2
PDLIM1P1-201ENST00000604187 RPAINQ86UA6 219 aa13.83□□□□□ -0.2
PDLIM1P1-201ENST00000604187 TMEM192Q8IY95 271 aa13.83□□□□□ -0.2
PDLIM1P1-201ENST00000604187 PRSS33Q8NF86 280 aa13.83□□□□□ -0.2
PDLIM1P1-201ENST00000604187 TOMM22Q9NS69 142 aa13.83□□□□□ -0.2
PDLIM1P1-201ENST00000604187 LCTP09848 1927 aa13.83□□□□□ -0.2
PDLIM1P1-201ENST00000604187 MYH4Q9Y623 1939 aa13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 RSPH10B2B2RC85 870 aa13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 RSPH10BP0C881 870 aa13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 PDHBP11177 359 aa13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 ZNF543Q08ER8 600 aa13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 HIC1Q14526 733 aa13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 SMAD2Q15796 467 aaKnown RBP13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 HERC4Q5GLZ8 1057 aaPredicted RBP13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 ZMYM1Q5SVZ6 1142 aa13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 DHX37Q8IY37 1157 aaKnown RBP13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 PPTC7Q8NI37 304 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms