RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 ATG4CQ96DT6 458 aa25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 LRRC27Q9C0I9 530 aa25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 A0A087WWV3 80 aa25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 ERCC5P28715 1186 aaPredicted RBP25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 HYIQ5T013 277 aa25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 PROCA1Q8NCQ7 364 aaPredicted RBP25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 CDK5RAP3Q96JB5 506 aa25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 MTRQ99707 1265 aa25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 NT5C3AQ9H0P0 336 aa25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 RPTORQ8N122 1335 aa25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 KDM3AQ9Y4C1 1321 aa25.04■■□□□ 1.6
PPFIA3-211ENST00000602848 SMCHD1A6NHR9 2005 aa25.03■■□□□ 1.6
PPFIA3-211ENST00000602848 FAM86B1E9PN63 330 aa25.03■■□□□ 1.6
PPFIA3-211ENST00000602848 FAM86B2P0C5J1 330 aa25.03■■□□□ 1.6
PPFIA3-211ENST00000602848 BMP6P22004 513 aa25.03■■□□□ 1.6
PPFIA3-211ENST00000602848 ISM2Q6H9L7 571 aa25.03■■□□□ 1.6
PPFIA3-211ENST00000602848 KCTD17Q8N5Z5 321 aa25.03■■□□□ 1.6
PPFIA3-211ENST00000602848 RLFQ13129 1914 aa25.03■■□□□ 1.6
PPFIA3-211ENST00000602848 IGLV3-22A0A075B6J6 115 aa25.02■■□□□ 1.6
PPFIA3-211ENST00000602848 SPDYE5A6NIY4 337 aa25.02■■□□□ 1.6
PPFIA3-211ENST00000602848 KCNB1Q14721 858 aa25.02■■□□□ 1.6
PPFIA3-211ENST00000602848 NIPA1Q7RTP0 329 aa25.02■■□□□ 1.6
PPFIA3-211ENST00000602848 SNX29Q8TEQ0 813 aa25.02■■□□□ 1.6
PPFIA3-211ENST00000602848 TRERF1Q96PN7 1200 aa25.02■■□□□ 1.6
PPFIA3-211ENST00000602848 C7orf25Q9BPX7 421 aa25.02■■□□□ 1.6
PPFIA3-211ENST00000602848 OTOFQ9HC10 1997 aa25.02■■□□□ 1.6
PPFIA3-211ENST00000602848 HOXA7P31268 230 aaPredicted RBP25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 SETQ01105 290 aaPredicted RBP25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 MYL5Q02045 173 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 GRB10Q13322 594 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 TMEM119Q4V9L6 283 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 DLK2Q6UY11 383 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 ERMNQ8TAM6 284 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 FRMPD4Q14CM0 1322 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 POTEMA6NI47 508 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 NFIBO00712 420 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 MSH4O15457 936 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 PLCB2Q00722 1185 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 PPIL2Q13356 520 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 CUL4BQ13620 913 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 CEP55Q53EZ4 464 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 HAUS3Q68CZ6 603 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 SV2BQ7L1I2 683 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 CCDC47Q96A33 483 aaKnown RBP25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 PNMA5Q96PV4 448 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 KCNH4Q9UQ05 1017 aa25.01■■□□□ 1.59
PPFIA3-211ENST00000602848 A0A0G2JLL6 359 aaPredicted RBP25■■□□□ 1.59
PPFIA3-211ENST00000602848 MEIS1O00470 390 aa25■■□□□ 1.59
PPFIA3-211ENST00000602848 AP5Z1O43299 807 aa25■■□□□ 1.59
PPFIA3-211ENST00000602848 TOMM70O94826 608 aa25■■□□□ 1.59
PPFIA3-211ENST00000602848 RPN1P04843 607 aaKnown RBP25■■□□□ 1.59
PPFIA3-211ENST00000602848 BCRP11274 1271 aa25■■□□□ 1.59
PPFIA3-211ENST00000602848 TTLL12Q14166 644 aaPredicted RBP25■■□□□ 1.59
PPFIA3-211ENST00000602848 PRRT2Q7Z6L0 340 aaPredicted RBP25■■□□□ 1.59
PPFIA3-211ENST00000602848 MB21D1Q8N884 522 aa25■■□□□ 1.59
PPFIA3-211ENST00000602848 SYTL5Q8TDW5 730 aaPredicted RBP25■■□□□ 1.59
PPFIA3-211ENST00000602848 TEX13BQ9BXU2 312 aa25■■□□□ 1.59
PPFIA3-211ENST00000602848 ZNF214Q9UL59 606 aaPredicted RBP25■■□□□ 1.59
PPFIA3-211ENST00000602848 NCAPHQ15003 741 aa24.99■■□□□ 1.59
PPFIA3-211ENST00000602848 MUM1L1Q5H9M0 696 aa24.99■■□□□ 1.59
PPFIA3-211ENST00000602848 XRRA1Q6P2D8 792 aa24.99■■□□□ 1.59
PPFIA3-211ENST00000602848 CNNM4Q6P4Q7 775 aa24.99■■□□□ 1.59
PPFIA3-211ENST00000602848 ENOX1Q8TC92 643 aaKnown RBP24.99■■□□□ 1.59
PPFIA3-211ENST00000602848 ELP3Q9H9T3 547 aa24.99■■□□□ 1.59
PPFIA3-211ENST00000602848 RBBP6Q7Z6E9 1792 aaKnown RBP24.99■■□□□ 1.59
PPFIA3-211ENST00000602848 SPDYE16A6NNV3 312 aaPredicted RBP24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 SPIRE1Q08AE8 756 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 LDLRAD1Q5T700 205 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 ZNF658Q5TYW1 1059 aaPredicted RBP24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 PCNX4Q63HM2 1172 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 MAP1SQ66K74 1059 aaPredicted RBP24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 CHADLQ6NUI6 762 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 RNF207Q6ZRF8 634 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 PLA2G4DQ86XP0 818 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 STAMQ92783 540 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 SLC5A5Q92911 643 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 TRIM5Q9C035 493 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 BLZF1Q9H2G9 400 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 RNF146Q9NTX7 359 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 CLEC11AQ9Y240 323 aa24.98■■□□□ 1.59
PPFIA3-211ENST00000602848 CCT6AP40227 531 aaKnown RBP24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 SNRNP48Q6IEG0 339 aaKnown RBP24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 LARP4BQ92615 738 aaKnown RBP24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 RAD54LQ92698 747 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 PLIN2Q99541 437 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 MXRA8Q9BRK3 442 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 BLOC1S4Q9NUP1 217 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 LOC285556D6RIA3 1793 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 CDC25BP30305 580 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 ZNF75DP51815 510 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 RPS6P62753 249 aaKnown RBP24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 TMEM132BQ14DG7 1078 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 MRFAP1L1Q96HT8 127 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 TRIM9Q9C026 710 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 PTPRFP10586 1907 aa24.97■■□□□ 1.59
PPFIA3-211ENST00000602848 RHOBTB3O94955 611 aa24.96■■□□□ 1.59
PPFIA3-211ENST00000602848 CASP1P29466 404 aa24.96■■□□□ 1.59
PPFIA3-211ENST00000602848 STAT3P40763 770 aa24.96■■□□□ 1.59
PPFIA3-211ENST00000602848 LBX2Q6XYB7 198 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms