RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 IMPACTQ9P2X3 320 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 IQCA1LA6NCM1 817 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 ADCY3O60266 1144 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 ITGAVP06756 1048 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 NOP2P46087 812 aaKnown RBP4.37□□□□□ -1.71
SGMS1-207ENST00000602619 RBM10P98175 930 aaKnown RBP4.37□□□□□ -1.71
SGMS1-207ENST00000602619 AMPD2Q01433 879 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 MVKQ03426 396 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 LONRF2Q1L5Z9 754 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 EEF1DP3Q658K8 133 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 CWF19L1Q69YN2 538 aaKnown RBP4.37□□□□□ -1.71
SGMS1-207ENST00000602619 CYP2R1Q6VVX0 501 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 C1orf159Q96HA4 380 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 ZDHHC15Q96MV8 337 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 DEPDC7Q96QD5 511 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 JMJD8Q96S16 334 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 CYP26B1Q9NR63 512 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 AKT3Q9Y243 479 aa4.37□□□□□ -1.71
SGMS1-207ENST00000602619 A0A1W2PQU0 124 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 MEIS1O00470 390 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 TBX1O43435 398 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 IFNGR1P15260 489 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 GJA9P57773 515 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 TBC1D10BQ4KMP7 808 aaPredicted RBP4.36□□□□□ -1.71
SGMS1-207ENST00000602619 GTF2IRD2BQ6EKJ0 949 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 CRIP3Q6Q6R5 217 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 ADAT2Q7Z6V5 191 aaKnown RBP4.36□□□□□ -1.71
SGMS1-207ENST00000602619 GTF2IRD2Q86UP8 949 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 SH3RF3Q8TEJ3 882 aaPredicted RBP4.36□□□□□ -1.71
SGMS1-207ENST00000602619 ARHGEF4Q9NR80 690 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 AP5S1Q9NUS5 200 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 BACE2Q9Y5Z0 518 aa4.36□□□□□ -1.71
SGMS1-207ENST00000602619 FAM221BA6H8Z2 402 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 NOP56O00567 594 aaKnown RBP4.35□□□□□ -1.71
SGMS1-207ENST00000602619 KCNH1O95259 989 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 PLATP00750 562 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 CD3EP07766 207 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 FGFR1P11362 822 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 HOXC12P31275 282 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 MC3RP41968 323 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 GFRA1P56159 465 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 CORO7P57737 925 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 MAP4K2Q12851 820 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 NFE2L2Q16236 605 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 SLC35F1Q5T1Q4 408 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 ACBD5Q5T8D3 534 aaPredicted RBP4.35□□□□□ -1.71
SGMS1-207ENST00000602619 PAQR3Q6TCH7 311 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 ZNF761Q86XN6 746 aaPredicted RBP4.35□□□□□ -1.71
SGMS1-207ENST00000602619 LRRC47Q8N1G4 583 aaKnown RBP4.35□□□□□ -1.71
SGMS1-207ENST00000602619 KREMEN2Q8NCW0 462 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 NPLOC4Q8TAT6 608 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 DVL3Q92997 716 aaPredicted RBP4.35□□□□□ -1.71
SGMS1-207ENST00000602619 CCDC140Q96MF4 163 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 CDADC1Q9BWV3 514 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 SSBP3Q9BWW4 388 aaPredicted RBP4.35□□□□□ -1.71
SGMS1-207ENST00000602619 SUGT1Q9Y2Z0 365 aa4.35□□□□□ -1.71
SGMS1-207ENST00000602619 TRBV23OR9-2A0A075B6M9 112 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 C2orf71A6NGG8 1288 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 STXBP3O00186 592 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 AGRPO00253 132 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 CPP00450 1065 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 CYBBP04839 570 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 DBHP09172 617 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 NCAM1P13591 858 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 PPP2R2AP63151 447 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 PRR5P85299 388 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 PPP2R5DQ14738 602 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 SV2CQ496J9 727 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 MTERF2Q49AM1 385 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 ZC3H12BQ5HYM0 836 aaKnown RBP4.34□□□□□ -1.71
SGMS1-207ENST00000602619 E4F1Q66K89 784 aaPredicted RBP4.34□□□□□ -1.71
SGMS1-207ENST00000602619 SPATC1Q76KD6 591 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 DPH6Q7L8W6 267 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 CHST13Q8NET6 341 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 NLGN2Q8NFZ4 835 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 PMFBP1Q8TBY8 1022 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 FRS2Q8WU20 508 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 BTN2A2Q8WVV5 523 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 PTCHD1Q96NR3 888 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 MMP19Q99542 508 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 RNF38Q9H0F5 515 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 SPATA6Q9NWH7 488 aaPredicted RBP4.34□□□□□ -1.71
SGMS1-207ENST00000602619 ST6GALNAC2Q9UJ37 374 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 CDK11AQ9UQ88 783 aaPredicted RBP4.34□□□□□ -1.71
SGMS1-207ENST00000602619 FAN1Q9Y2M0 1017 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 NPFFR2Q9Y5X5 522 aa4.34□□□□□ -1.71
SGMS1-207ENST00000602619 VAMP4O75379 141 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 THBDP07204 575 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 ASGR2P07307 311 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 GSTM1P09488 218 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 GRIA2P42262 883 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 SARSP49591 514 aaKnown RBP4.33□□□□□ -1.72
SGMS1-207ENST00000602619 SCRN1Q12765 414 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 HSP90AA2PQ14568 343 aaPredicted RBP4.33□□□□□ -1.72
SGMS1-207ENST00000602619 CDSNQ15517 529 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 CCDC144BQ3MJ40 725 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 Q8N1Y9 231 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 ZBTB38Q8NAP3 1195 aaPredicted RBP4.33□□□□□ -1.72
SGMS1-207ENST00000602619 SRPK1Q96SB4 655 aaKnown RBP4.33□□□□□ -1.72
SGMS1-207ENST00000602619 AARSD1Q9BTE6 412 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms