RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 A0A0U1RQG5 324 aaPredicted RBP20.18■□□□□ 0.82
IRF3-230ENST00000601809 ARVCFO00192 962 aa20.18■□□□□ 0.82
IRF3-230ENST00000601809 ITGB8P26012 769 aa20.18■□□□□ 0.82
IRF3-230ENST00000601809 MRPS9P82933 396 aaKnown RBP20.18■□□□□ 0.82
IRF3-230ENST00000601809 PURAQ00577 322 aaKnown RBP20.18■□□□□ 0.82
IRF3-230ENST00000601809 ARHGAP1Q07960 439 aa20.18■□□□□ 0.82
IRF3-230ENST00000601809 NTRK3Q16288 839 aa20.18■□□□□ 0.82
IRF3-230ENST00000601809 WWC2Q6AWC2 1192 aa20.18■□□□□ 0.82
IRF3-230ENST00000601809 OR6J1Q8NGC5 347 aa20.18■□□□□ 0.82
IRF3-230ENST00000601809 A0A1W2PPC1 479 aa20.17■□□□□ 0.82
IRF3-230ENST00000601809 KIAA0355O15063 1070 aa20.17■□□□□ 0.82
IRF3-230ENST00000601809 CABYRO75952 493 aa20.17■□□□□ 0.82
IRF3-230ENST00000601809 LY6KQ17RY6 165 aa20.17■□□□□ 0.82
IRF3-230ENST00000601809 SEPT14Q6ZU15 432 aa20.17■□□□□ 0.82
IRF3-230ENST00000601809 FCHSD1Q86WN1 690 aa20.17■□□□□ 0.82
IRF3-230ENST00000601809 FAM126BQ8IXS8 530 aa20.17■□□□□ 0.82
IRF3-230ENST00000601809 GPKOWQ92917 476 aaPredicted RBP eCLIP20.17■□□□□ 0.82
IRF3-230ENST00000601809 EMID1Q96A84 441 aaPredicted RBP20.17■□□□□ 0.82
IRF3-230ENST00000601809 MYH7BA7E2Y1 1941 aa20.16■□□□□ 0.82
IRF3-230ENST00000601809 CD4P01730 458 aa20.16■□□□□ 0.82
IRF3-230ENST00000601809 CLTBP09497 229 aa20.16■□□□□ 0.82
IRF3-230ENST00000601809 PDIA3P30101 505 aaKnown RBP20.16■□□□□ 0.82
IRF3-230ENST00000601809 METAP2P50579 478 aaKnown RBP eCLIP20.16■□□□□ 0.82
IRF3-230ENST00000601809 FXR1P51114 621 aaKnown RBP eCLIP20.16■□□□□ 0.82
IRF3-230ENST00000601809 INPP4AQ96PE3 977 aaPredicted RBP20.16■□□□□ 0.82
IRF3-230ENST00000601809 TBX21Q9UL17 535 aa20.16■□□□□ 0.82
IRF3-230ENST00000601809 V9GY48 417 aaPredicted RBP20.16■□□□□ 0.82
IRF3-230ENST00000601809 STXBP3O00186 592 aa20.15■□□□□ 0.82
IRF3-230ENST00000601809 PQBP1O60828 265 aaKnown RBP20.15■□□□□ 0.82
IRF3-230ENST00000601809 SEC24BO95487 1268 aa20.15■□□□□ 0.82
IRF3-230ENST00000601809 MYCLP12524 364 aaPredicted RBP20.15■□□□□ 0.82
IRF3-230ENST00000601809 CCND2P30279 289 aa20.15■□□□□ 0.82
IRF3-230ENST00000601809 CPT1AP50416 773 aa20.15■□□□□ 0.82
IRF3-230ENST00000601809 SP2Q02086 613 aa20.15■□□□□ 0.82
IRF3-230ENST00000601809 SEMA3FQ13275 785 aa20.15■□□□□ 0.82
IRF3-230ENST00000601809 PKN1Q16512 942 aa20.15■□□□□ 0.82
IRF3-230ENST00000601809 PPP1R18Q6NYC8 613 aa20.15■□□□□ 0.82
IRF3-230ENST00000601809 ZFP91Q96JP5 570 aaPredicted RBP20.15■□□□□ 0.82
IRF3-230ENST00000601809 UPF3BQ9BZI7 483 aaKnown RBP20.15■□□□□ 0.82
IRF3-230ENST00000601809 PSTPIP2Q9H939 334 aa20.15■□□□□ 0.82
IRF3-230ENST00000601809 MROH7Q68CQ1 1323 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 hCG_1984214I3L0E3 225 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 ZEB2O60315 1214 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 GH1P01241 217 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 HOXD8P13378 290 aaPredicted RBP20.14■□□□□ 0.81
IRF3-230ENST00000601809 ICAM3P32942 547 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 ANAPC15P60006 121 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 PSMC6P62333 389 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 MDM2Q00987 491 aaPredicted RBP20.14■□□□□ 0.81
IRF3-230ENST00000601809 ITGA7Q13683 1181 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 UBE2SQ16763 222 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 HEATR3Q7Z4Q2 680 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 TEX2Q8IWB9 1127 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 ZNF713Q8N859 430 aaPredicted RBP20.14■□□□□ 0.81
IRF3-230ENST00000601809 POLR3EQ9NVU0 708 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 BARHL2Q9NY43 387 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 CYP46A1Q9Y6A2 500 aa20.14■□□□□ 0.81
IRF3-230ENST00000601809 LAMA2P24043 3122 aaKnown RBP20.14■□□□□ 0.81
IRF3-230ENST00000601809 CCDC196A0A1B0GTZ2 297 aa20.13■□□□□ 0.81
IRF3-230ENST00000601809 MMP3P08254 477 aa20.13■□□□□ 0.81
IRF3-230ENST00000601809 CLK2P49760 499 aaKnown RBP20.13■□□□□ 0.81
IRF3-230ENST00000601809 FGD1P98174 961 aa20.13■□□□□ 0.81
IRF3-230ENST00000601809 PFKFB3Q16875 520 aaPredicted RBP20.13■□□□□ 0.81
IRF3-230ENST00000601809 PCNX4Q63HM2 1172 aa20.13■□□□□ 0.81
IRF3-230ENST00000601809 SMARCC2Q8TAQ2 1214 aa20.13■□□□□ 0.81
IRF3-230ENST00000601809 AFG1LQ8WV93 481 aa20.13■□□□□ 0.81
IRF3-230ENST00000601809 ALDH8A1Q9H2A2 487 aaPredicted RBP20.13■□□□□ 0.81
IRF3-230ENST00000601809 DOCK5Q9H7D0 1870 aa20.13■□□□□ 0.81
IRF3-230ENST00000601809 DCDC2CA8MYV0 355 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 STAM2O75886 525 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 TGFB3P10600 412 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 IFNAR1P17181 557 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 UBA1P22314 1058 aaKnown RBP20.12■□□□□ 0.81
IRF3-230ENST00000601809 MYSM1Q5VVJ2 828 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 XRRA1Q6P2D8 792 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 KCNV1Q6PIU1 500 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 KAT2BQ92831 832 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 CUL5Q93034 780 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 ZNF274Q96GC6 653 aaPredicted RBP20.12■□□□□ 0.81
IRF3-230ENST00000601809 MTG1Q9BT17 334 aaPredicted RBP20.12■□□□□ 0.81
IRF3-230ENST00000601809 SEZ6LQ9BYH1 1024 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 BCAS3Q9H6U6 928 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 NCOA5Q9HCD5 579 aaKnown RBP20.12■□□□□ 0.81
IRF3-230ENST00000601809 RIC8AQ9NPQ8 531 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 PRDM5Q9NQX1 630 aaPredicted RBP20.12■□□□□ 0.81
IRF3-230ENST00000601809 MRVI1Q9Y6F6 885 aa20.12■□□□□ 0.81
IRF3-230ENST00000601809 SPATA31C2B4DYI2 1134 aa20.11■□□□□ 0.81
IRF3-230ENST00000601809 ADAMTS3O15072 1205 aa20.11■□□□□ 0.81
IRF3-230ENST00000601809 PRPF3O43395 683 aaKnown RBP20.11■□□□□ 0.81
IRF3-230ENST00000601809 CELF3Q5SZQ8 465 aaKnown RBP20.11■□□□□ 0.81
IRF3-230ENST00000601809 BADQ92934 168 aa20.11■□□□□ 0.81
IRF3-230ENST00000601809 KPNA6O60684 536 aa20.1■□□□□ 0.81
IRF3-230ENST00000601809 MYL3P08590 195 aa20.1■□□□□ 0.81
IRF3-230ENST00000601809 SCG2P13521 617 aa20.1■□□□□ 0.81
IRF3-230ENST00000601809 NAPAP54920 295 aa20.1■□□□□ 0.81
IRF3-230ENST00000601809 C8orf34Q49A92 452 aa20.1■□□□□ 0.81
IRF3-230ENST00000601809 PPTC7Q8NI37 304 aa20.1■□□□□ 0.81
IRF3-230ENST00000601809 PHKBQ93100 1093 aa20.1■□□□□ 0.81
IRF3-230ENST00000601809 VTI1AQ96AJ9 217 aa20.1■□□□□ 0.81
IRF3-230ENST00000601809 RNF26Q9BY78 433 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms