RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	TXN	P10599	105 aa	Known RBP	13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	CALML3	P27482	149 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	SLC16A2	P36021	539 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	ARHGAP1	Q07960	439 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	PDE4D	Q08499	809 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	IKBKE	Q14164	716 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	TIGD5	Q53EQ6	642 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	IER5L	Q5T953	404 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	BTNL9	Q6UXG8	535 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	BANK1	Q8NDB2	785 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	MFSD14A	Q96MC6	490 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	ALG13	Q9NP73	1137 aa	Known RBP	13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	GTF2IRD1	Q9UHL9	959 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	MUTYH	Q9UIF7	546 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	STX8	Q9UNK0	236 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	INSL6	Q9Y581	213 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	RALGAPA2	Q2PPJ7	1873 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	PATL2	C9JE40	543 aa	Known RBP	13.07	□□□□□ -0.32
NUP62-222	ENST00000600935		H3BNC9	293 aa		13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	RNF113A	O15541	343 aa	Known RBP	13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	GNAT2	P19087	354 aa		13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	RPS6	P62753	249 aa	Known RBP	13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	PDE4B	Q07343	736 aa		13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	HIC1	Q14526	733 aa		13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	CTC1	Q2NKJ3	1217 aa		13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	ZNF618	Q5T7W0	954 aa		13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	INCENP	Q9NQS7	918 aa		13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	HDAC6	Q9UBN7	1215 aa		13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	CTNNA3	Q9UI47	895 aa		13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	DMXL1	Q9Y485	3027 aa		13.07	□□□□□ -0.32
NUP62-222	ENST00000600935	FOXP2	O15409	715 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	SMARCA5	O60264	1052 aa	Predicted RBP	13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	ST18	O60284	1047 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	LGR5	O75473	907 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	APP	P05067	770 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	DLX2	Q07687	328 aa	Predicted RBP	13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	PPARA	Q07869	468 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	TCF15	Q12870	199 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	SMAD2	Q15796	467 aa	Known RBP	13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	PTPRO	Q16827	1216 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	RNF207	Q6ZRF8	634 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	DNER	Q8NFT8	737 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	CRBN	Q96SW2	442 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	SEC62	Q99442	399 aa	Known RBP	13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	NSUN3	Q9H649	340 aa	Known RBP	13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	ZBTB40	Q9NUA8	1239 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	MTMR7	Q9Y216	660 aa		13.06	□□□□□ -0.32
NUP62-222	ENST00000600935	HAS3	O00219	553 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	HMMR	O75330	724 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	ZNF200	P98182	395 aa	Predicted RBP	13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	PTK7	Q13308	1070 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	GPM6B	Q13491	265 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	LY6K	Q17RY6	165 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	CCDC96	Q2M329	555 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	SYDE2	Q5VT97	1194 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	BMP8A	Q7Z5Y6	402 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	RPAIN	Q86UA6	219 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	RNF135	Q8IUD6	432 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	MYOCD	Q8IZQ8	938 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	DBF4B	Q8NFT6	615 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	DCAF4	Q8WV16	495 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	OSBPL7	Q9BZF2	842 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	UPF3B	Q9BZI7	483 aa	Known RBP	13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	CLDND1	Q9NY35	253 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	FAM50B	Q9Y247	325 aa		13.05	□□□□□ -0.32
NUP62-222	ENST00000600935	FRYL	O94915	3013 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	MBTPS2	O43462	519 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	F2	P00734	622 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	LINC00271	P0C7V0	271 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	PSEN2	P49810	448 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	PTPN5	P54829	565 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	TSHZ3	Q63HK5	1081 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	EP400NL	Q6ZTU2	488 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	FBXO11	Q86XK2	927 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	TMEM192	Q8IY95	271 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	EDA	Q92838	391 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	SAMD11	Q96NU1	681 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	ECHDC1	Q9NTX5	307 aa		13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	RIF1	Q5UIP0	2472 aa	Known RBP	13.04	□□□□□ -0.32
NUP62-222	ENST00000600935	TSPY2	A6NKD2	308 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	TBX10	O75333	385 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	GH1	P01241	217 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	AMH	P03971	560 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	ZFY	P08048	801 aa	Predicted RBP	13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	CTDSPL2	Q05D32	466 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	HYAL1	Q12794	435 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	CLUL1	Q15846	466 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	PLEKHG4	Q58EX7	1191 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	PPP4R3B	Q5MIZ7	849 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	TOP1MT	Q969P6	601 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	PTPRZ1	P23471	2315 aa	Predicted RBP	13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	PLXNA3	P51805	1871 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	MYH7B	A7E2Y1	1941 aa		13.03	□□□□□ -0.32
NUP62-222	ENST00000600935	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.02	□□□□□ -0.33
NUP62-222	ENST00000600935	SLC3A2	P08195	630 aa	Known RBP	13.02	□□□□□ -0.33
NUP62-222	ENST00000600935	ZNF286B	P0CG31	522 aa		13.02	□□□□□ -0.33
NUP62-222	ENST00000600935	HOXD8	P13378	290 aa	Predicted RBP	13.02	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms