RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 GTF2IRD1Q9UHL9 959 aa20.94■□□□□ 0.94
SSBP4-207ENST00000600244 PRR12Q9ULL5 1215 aa20.94■□□□□ 0.94
SSBP4-207ENST00000600244 MYO15AQ9UKN7 3530 aa20.94■□□□□ 0.94
SSBP4-207ENST00000600244 GSG1L2A8MUP6 293 aa20.93■□□□□ 0.94
SSBP4-207ENST00000600244 LOC730098B7Z3J9 87 aa20.93■□□□□ 0.94
SSBP4-207ENST00000600244 TBX10O75333 385 aa20.93■□□□□ 0.94
SSBP4-207ENST00000600244 TXNP10599 105 aaKnown RBP20.93■□□□□ 0.94
SSBP4-207ENST00000600244 EDNRBP24530 442 aa20.93■□□□□ 0.94
SSBP4-207ENST00000600244 IKQ13123 557 aaPredicted RBP20.93■□□□□ 0.94
SSBP4-207ENST00000600244 CBX2Q14781 532 aaPredicted RBP20.93■□□□□ 0.94
SSBP4-207ENST00000600244 RHPN1Q8TCX5 695 aa20.93■□□□□ 0.94
SSBP4-207ENST00000600244 WNT8BQ93098 351 aa20.93■□□□□ 0.94
SSBP4-207ENST00000600244 ASIC4Q96FT7 647 aa20.93■□□□□ 0.94
SSBP4-207ENST00000600244 FSD1Q9BTV5 496 aa20.93■□□□□ 0.94
SSBP4-207ENST00000600244 CD207Q9UJ71 328 aa20.93■□□□□ 0.94
SSBP4-207ENST00000600244 CCPG1Q9ULG6 757 aa20.93■□□□□ 0.94
SSBP4-207ENST00000600244 MINDY4BA8MYZ0 360 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 H0Y858 1186 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 PRDM1O75626 825 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 ICAM1P05362 532 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 MCCP23508 829 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 SLC1A4P43007 532 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 SIGLEC14Q08ET2 396 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 PTK7Q13308 1070 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 GIMAP6Q6P9H5 292 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 NEDD1Q8NHV4 660 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 TOP1MTQ969P6 601 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 STRBPQ96SI9 672 aaKnown RBP20.92■□□□□ 0.94
SSBP4-207ENST00000600244 TLR9Q9NR96 1032 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 HDAC6Q9UBN7 1215 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 ISY1Q9ULR0 285 aaKnown RBP20.92■□□□□ 0.94
SSBP4-207ENST00000600244 ATG2AQ2TAZ0 1938 aa20.92■□□□□ 0.94
SSBP4-207ENST00000600244 PRR23AA6NEV1 266 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 NFIBO00712 420 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 ARIH2O95376 493 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 EYA4O95677 639 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 ID4P47928 161 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 RCSD1Q6JBY9 416 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 CCDC62Q6P9F0 684 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 AFG1LQ8WV93 481 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 MSLNLQ96KJ4 702 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 YME1L1Q96TA2 773 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 LMAN2LQ9H0V9 348 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 BOLA2Q9H3K6 86 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 TRPC6Q9Y210 931 aa20.91■□□□□ 0.94
SSBP4-207ENST00000600244 CACNA1BQ00975 2339 aa20.9■□□□□ 0.94
SSBP4-207ENST00000600244 PLIN4Q96Q06 1357 aa20.9■□□□□ 0.94
SSBP4-207ENST00000600244 C5orf67F2Z3F1 127 aa20.9■□□□□ 0.94
SSBP4-207ENST00000600244 MMP3P08254 477 aa20.9■□□□□ 0.94
SSBP4-207ENST00000600244 GTF2F1P35269 517 aaKnown RBP eCLIP20.9■□□□□ 0.94
SSBP4-207ENST00000600244 NUBP1P53384 320 aa20.9■□□□□ 0.94
SSBP4-207ENST00000600244 PDE4DQ08499 809 aa20.9■□□□□ 0.94
SSBP4-207ENST00000600244 ADAM15Q13444 863 aa20.9■□□□□ 0.94
SSBP4-207ENST00000600244 CEP85Q6P2H3 762 aa20.9■□□□□ 0.94
SSBP4-207ENST00000600244 KCTD1Q719H9 257 aa20.9■□□□□ 0.94
SSBP4-207ENST00000600244 EMSYQ7Z589 1322 aa20.89■□□□□ 0.93
SSBP4-207ENST00000600244 GRM6O15303 877 aa20.89■□□□□ 0.93
SSBP4-207ENST00000600244 LINC01565O15544 149 aa20.89■□□□□ 0.93
SSBP4-207ENST00000600244 PLEKHG4Q58EX7 1191 aa20.89■□□□□ 0.93
SSBP4-207ENST00000600244 CLASRPQ8N2M8 674 aaKnown RBP20.89■□□□□ 0.93
SSBP4-207ENST00000600244 CHMP4CQ96CF2 233 aa20.89■□□□□ 0.93
SSBP4-207ENST00000600244 ZNF287Q9HBT7 754 aa20.89■□□□□ 0.93
SSBP4-207ENST00000600244 NLRC5Q86WI3 1866 aa20.89■□□□□ 0.93
SSBP4-207ENST00000600244 GVINP1Q7Z2Y8 2422 aa20.88■□□□□ 0.93
SSBP4-207ENST00000600244 RB1P06400 928 aa20.88■□□□□ 0.93
SSBP4-207ENST00000600244 LINC00271P0C7V0 271 aa20.88■□□□□ 0.93
SSBP4-207ENST00000600244 NBL1P41271 181 aa20.88■□□□□ 0.93
SSBP4-207ENST00000600244 PDE4BQ07343 736 aa20.88■□□□□ 0.93
SSBP4-207ENST00000600244 SLC30A10Q6XR72 485 aa20.88■□□□□ 0.93
SSBP4-207ENST00000600244 HAUS7Q99871 368 aa20.88■□□□□ 0.93
SSBP4-207ENST00000600244 RANBP17Q9H2T7 1088 aaKnown RBP20.88■□□□□ 0.93
SSBP4-207ENST00000600244 PTPDC1A2A3K4 754 aa20.87■□□□□ 0.93
SSBP4-207ENST00000600244 ATP5JP18859 108 aa20.87■□□□□ 0.93
SSBP4-207ENST00000600244 CASTP20810 708 aaKnown RBP20.87■□□□□ 0.93
SSBP4-207ENST00000600244 ARHGAP1Q07960 439 aa20.87■□□□□ 0.93
SSBP4-207ENST00000600244 HSP90AB4PQ58FF6 505 aa20.87■□□□□ 0.93
SSBP4-207ENST00000600244 C7orf31Q8N865 590 aa20.87■□□□□ 0.93
SSBP4-207ENST00000600244 CLEC4DQ8WXI8 215 aa20.87■□□□□ 0.93
SSBP4-207ENST00000600244 RALGAPA2Q2PPJ7 1873 aa20.87■□□□□ 0.93
SSBP4-207ENST00000600244 HAS3O00219 553 aa20.86■□□□□ 0.93
SSBP4-207ENST00000600244 GALR2O43603 387 aaPredicted RBP20.86■□□□□ 0.93
SSBP4-207ENST00000600244 IFIT2P09913 472 aaKnown RBP20.86■□□□□ 0.93
SSBP4-207ENST00000600244 CALML3P27482 149 aa20.86■□□□□ 0.93
SSBP4-207ENST00000600244 PSEN2P49810 448 aa20.86■□□□□ 0.93
SSBP4-207ENST00000600244 ZNF200P98182 395 aaPredicted RBP20.86■□□□□ 0.93
SSBP4-207ENST00000600244 IGFLR1Q9H665 355 aa20.86■□□□□ 0.93
SSBP4-207ENST00000600244 DMDP11532 3685 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.85■□□□□ 0.93
SSBP4-207ENST00000600244 UPP2O95045 317 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 TSPY3P0CV98 308 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 TSPY8P0CW00 308 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 BMPR1AP36894 532 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 HIC1Q14526 733 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 ZSCAN25Q6NSZ9 544 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 SMRP1Q8NCR6 262 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 DNERQ8NFT8 737 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 MPHOSPH6Q99547 160 aaKnown RBP20.85■□□□□ 0.93
SSBP4-207ENST00000600244 C11orf84Q9BUA3 381 aaPredicted RBP20.85■□□□□ 0.93
SSBP4-207ENST00000600244 EPB41L4AQ9HCS5 686 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms