RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 CLRN2A0PK11 232 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 ZNF157P51786 506 aaPredicted RBP12.35□□□□□ -0.43
SMG9-207ENST00000598860 NRLP54845 237 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 GPLD1P80108 840 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 MECOMQ03112 1051 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 RAD51AP2Q09MP3 1159 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 GRIK5Q16478 980 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 ZMYM1Q5SVZ6 1142 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 HFE2Q6ZVN8 426 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 TEKT1Q969V4 418 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 NOL10Q9BSC4 688 aaKnown RBP12.35□□□□□ -0.43
SMG9-207ENST00000598860 VEZTQ9HBM0 779 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 MYH8P13535 1937 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 ZNF532Q9HCE3 1301 aa12.35□□□□□ -0.43
SMG9-207ENST00000598860 TCRBV5S4A2TA0A5A2 114 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 UBE2Q2LH0YL09 131 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 FOXN1O15353 648 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 GADD45BO75293 160 aaPredicted RBP12.34□□□□□ -0.43
SMG9-207ENST00000598860 CYP7A1P22680 504 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 SNRPNP63162 240 aaKnown RBP12.34□□□□□ -0.43
SMG9-207ENST00000598860 NOGQ13253 232 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 NMIQ13287 307 aaPredicted RBP12.34□□□□□ -0.43
SMG9-207ENST00000598860 PCSK7Q16549 785 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 HHIPL2Q6UWX4 724 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 OR13H1Q8NG92 308 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 NSUN5Q96P11 429 aaKnown RBP12.34□□□□□ -0.43
SMG9-207ENST00000598860 TDRD3Q9H7E2 651 aaKnown RBP12.34□□□□□ -0.43
SMG9-207ENST00000598860 KANSL3Q9P2N6 904 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 ZNF70Q9UC06 446 aaPredicted RBP12.34□□□□□ -0.43
SMG9-207ENST00000598860 STARD13Q9Y3M8 1113 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 PPP2R3BQ9Y5P8 575 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 MROH7-TTC4A0A0A0MT08 1334 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 GAKO14976 1311 aa12.34□□□□□ -0.43
SMG9-207ENST00000598860 SGSM2O43147 1006 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
SMG9-207ENST00000598860 REC8O95072 547 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 BAG3O95817 575 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 CPB1P15086 417 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 SOX18P35713 384 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 CTCFP49711 727 aaPredicted RBP12.33□□□□□ -0.44
SMG9-207ENST00000598860 TNFAIP1Q13829 316 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 CWC27Q6UX04 472 aaKnown RBP12.33□□□□□ -0.44
SMG9-207ENST00000598860 MOB2Q70IA6 237 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 ARMC9Q7Z3E5 817 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 FAM35AQ86V20 835 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 BCO2Q9BYV7 579 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 FAM8A1Q9UBU6 413 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 NAGPAQ9UK23 515 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 CCDC171Q6TFL3 1326 aa12.33□□□□□ -0.44
SMG9-207ENST00000598860 RPAP1Q9BWH6 1393 aaPredicted RBP12.32□□□□□ -0.44
SMG9-207ENST00000598860 A0A0D9SFI3 127 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 FAM155AB1AL88 458 aaPredicted RBP12.32□□□□□ -0.44
SMG9-207ENST00000598860 ALBP02768 609 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 HOXB4P17483 251 aaPredicted RBP12.32□□□□□ -0.44
SMG9-207ENST00000598860 GNAT2P19087 354 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 TNNI2P48788 182 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 PRKG1Q13976 671 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 RASA3Q14644 834 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 NAALADL2Q58DX5 795 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 KANK3Q6NY19 840 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 NXPE4Q6UWF7 544 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 ZDHHC15Q96MV8 337 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
SMG9-207ENST00000598860 DDX60LQ5H9U9 1706 aaKnown RBP12.31□□□□□ -0.44
SMG9-207ENST00000598860 PAPPA2Q9BXP8 1791 aa12.31□□□□□ -0.44
SMG9-207ENST00000598860 GPR75-ASB3A0A0A6YYF3 556 aa12.31□□□□□ -0.44
SMG9-207ENST00000598860 J3QW42 95 aa12.31□□□□□ -0.44
SMG9-207ENST00000598860 USP17L7P0C7H9 530 aa12.31□□□□□ -0.44
SMG9-207ENST00000598860 KIF23Q02241 960 aaPredicted RBP12.31□□□□□ -0.44
SMG9-207ENST00000598860 COL13A1Q5TAT6 717 aaPredicted RBP12.31□□□□□ -0.44
SMG9-207ENST00000598860 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
SMG9-207ENST00000598860 OSBP2Q969R2 916 aa12.31□□□□□ -0.44
SMG9-207ENST00000598860 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
SMG9-207ENST00000598860 SUV39H2Q9H5I1 410 aa12.31□□□□□ -0.44
SMG9-207ENST00000598860 TMOD2Q9NZR1 351 aa12.31□□□□□ -0.44
SMG9-207ENST00000598860 ANGEL1Q9UNK9 670 aaKnown RBP12.31□□□□□ -0.44
SMG9-207ENST00000598860 PHF20L1A8MW92 1017 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 TCP10L2B9ZVM9 353 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 M0R082 166 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 GPAA1O43292 621 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 CA12O43570 354 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 BTDP43251 543 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 DGKGP49619 791 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 LBX1P52954 281 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 GRM2Q14416 872 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 NBPF12Q5TAG4 269 aaPredicted RBP12.3□□□□□ -0.44
SMG9-207ENST00000598860 APOBEC3HQ6NTF7 200 aaKnown RBP12.3□□□□□ -0.44
SMG9-207ENST00000598860 PSAPL1Q6NUJ1 521 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 C8orf86Q6ZUL3 223 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 MICALL1Q8N3F8 863 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 ZNF417Q8TAU3 575 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 ZNF384Q8TF68 577 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 NUDT8Q8WV74 236 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 ZNF587Q96SQ5 575 aaPredicted RBP12.3□□□□□ -0.44
SMG9-207ENST00000598860 PUS7LQ9H0K6 701 aaKnown RBP12.3□□□□□ -0.44
SMG9-207ENST00000598860 PRDM10Q9NQV6 1147 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 LATS2Q9NRM7 1088 aa12.3□□□□□ -0.44
SMG9-207ENST00000598860 DAGLAQ9Y4D2 1042 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms