RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 STXBP3O00186 592 aa26.24■■□□□ 1.79
IRF3-220ENST00000598108 NKRFO15226 690 aaKnown RBP eCLIP26.24■■□□□ 1.79
IRF3-220ENST00000598108 TLE2Q04725 743 aa26.24■■□□□ 1.79
IRF3-220ENST00000598108 PHKBQ93100 1093 aa26.24■■□□□ 1.79
IRF3-220ENST00000598108 VTI1AQ96AJ9 217 aa26.24■■□□□ 1.79
IRF3-220ENST00000598108 DDX41Q9UJV9 622 aaKnown RBP26.24■■□□□ 1.79
IRF3-220ENST00000598108 COLQQ9Y215 455 aaPredicted RBP26.24■■□□□ 1.79
IRF3-220ENST00000598108 ELP1O95163 1332 aa26.23■■□□□ 1.79
IRF3-220ENST00000598108 EIF5BO60841 1220 aaKnown RBP26.23■■□□□ 1.79
IRF3-220ENST00000598108 CCND2P30279 289 aa26.23■■□□□ 1.79
IRF3-220ENST00000598108 MRPS9P82933 396 aaKnown RBP26.23■■□□□ 1.79
IRF3-220ENST00000598108 PKN1Q16512 942 aa26.23■■□□□ 1.79
IRF3-220ENST00000598108 CHRDL2Q6WN34 429 aa26.23■■□□□ 1.79
IRF3-220ENST00000598108 ZNF274Q96GC6 653 aaPredicted RBP26.23■■□□□ 1.79
IRF3-220ENST00000598108 BARHL2Q9NY43 387 aa26.23■■□□□ 1.79
IRF3-220ENST00000598108 PRPF3O43395 683 aaKnown RBP26.22■■□□□ 1.79
IRF3-220ENST00000598108 NAPAP54920 295 aa26.22■■□□□ 1.79
IRF3-220ENST00000598108 PFKFB3Q16875 520 aaPredicted RBP26.22■■□□□ 1.79
IRF3-220ENST00000598108 GRIN2DO15399 1336 aa26.21■■□□□ 1.79
IRF3-220ENST00000598108 ZEB2O60315 1214 aa26.21■■□□□ 1.79
IRF3-220ENST00000598108 CDK7P50613 346 aa26.21■■□□□ 1.79
IRF3-220ENST00000598108 ARHGAP1Q07960 439 aa26.21■■□□□ 1.79
IRF3-220ENST00000598108 SH3RF1Q7Z6J0 888 aa26.21■■□□□ 1.79
IRF3-220ENST00000598108 ALDH8A1Q9H2A2 487 aaPredicted RBP26.21■■□□□ 1.79
IRF3-220ENST00000598108 PRO3102Q9H379 93 aa26.21■■□□□ 1.79
IRF3-220ENST00000598108 RTEL1Q9NZ71 1219 aa26.21■■□□□ 1.79
IRF3-220ENST00000598108 MRVI1Q9Y6F6 885 aa26.21■■□□□ 1.79
IRF3-220ENST00000598108 A6NJR5 290 aa26.2■■□□□ 1.78
IRF3-220ENST00000598108 PQBP1O60828 265 aaKnown RBP26.2■■□□□ 1.78
IRF3-220ENST00000598108 SCG2P13521 617 aa26.2■■□□□ 1.78
IRF3-220ENST00000598108 IFNAR1P17181 557 aa26.2■■□□□ 1.78
IRF3-220ENST00000598108 STK3Q13188 491 aa26.2■■□□□ 1.78
IRF3-220ENST00000598108 AFG1LQ8WV93 481 aa26.2■■□□□ 1.78
IRF3-220ENST00000598108 RIC8AQ9NPQ8 531 aa26.2■■□□□ 1.78
IRF3-220ENST00000598108 TPCN1Q9ULQ1 816 aa26.2■■□□□ 1.78
IRF3-220ENST00000598108 SMCO2A6NFE2 343 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 ARVCFO00192 962 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 CABYRO75952 493 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 GH1P01241 217 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 CPT1AP50416 773 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 PSMC6P62333 389 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 SP2Q02086 613 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 PPP1R18Q6NYC8 613 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 ANKRD33Q7Z3H0 272 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 SLC26A6Q9BXS9 759 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 PDLIM7Q9NR12 457 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 PCDHA6Q9UN73 950 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 PCDHA8Q9Y5H6 950 aa26.19■■□□□ 1.78
IRF3-220ENST00000598108 A0A0U1RQG5 324 aaPredicted RBP26.18■■□□□ 1.78
IRF3-220ENST00000598108 TRIM43BA6NCK2 446 aa26.18■■□□□ 1.78
IRF3-220ENST00000598108 hCG_1984214I3L0E3 225 aa26.18■■□□□ 1.78
IRF3-220ENST00000598108 ADAMTS3O15072 1205 aa26.18■■□□□ 1.78
IRF3-220ENST00000598108 MYL3P08590 195 aa26.18■■□□□ 1.78
IRF3-220ENST00000598108 MAGEA10P43363 369 aaPredicted RBP26.18■■□□□ 1.78
IRF3-220ENST00000598108 RANBP2P49792 3224 aaKnown RBP26.18■■□□□ 1.78
IRF3-220ENST00000598108 ADCY7P51828 1080 aa26.18■■□□□ 1.78
IRF3-220ENST00000598108 PURAQ00577 322 aaKnown RBP26.18■■□□□ 1.78
IRF3-220ENST00000598108 PCNX4Q63HM2 1172 aa26.18■■□□□ 1.78
IRF3-220ENST00000598108 ZNF713Q8N859 430 aaPredicted RBP26.18■■□□□ 1.78
IRF3-220ENST00000598108 TRIM43Q96BQ3 446 aaPredicted RBP26.18■■□□□ 1.78
IRF3-220ENST00000598108 INPP4AQ96PE3 977 aaPredicted RBP26.18■■□□□ 1.78
IRF3-220ENST00000598108 GDF15Q99988 308 aa26.18■■□□□ 1.78
IRF3-220ENST00000598108 BCAS3Q9H6U6 928 aa26.18■■□□□ 1.78
IRF3-220ENST00000598108 RBM27Q9P2N5 1060 aaKnown RBP26.18■■□□□ 1.78
IRF3-220ENST00000598108 AK2P54819 239 aa26.17■■□□□ 1.78
IRF3-220ENST00000598108 FAAP100Q0VG06 881 aa26.17■■□□□ 1.78
IRF3-220ENST00000598108 SEMA3FQ13275 785 aa26.17■■□□□ 1.78
IRF3-220ENST00000598108 ITGA7Q13683 1181 aa26.17■■□□□ 1.78
IRF3-220ENST00000598108 SLC43A3Q8NBI5 491 aa26.17■■□□□ 1.78
IRF3-220ENST00000598108 TOX2Q96NM4 488 aa26.17■■□□□ 1.78
IRF3-220ENST00000598108 RNF26Q9BY78 433 aaPredicted RBP26.17■■□□□ 1.78
IRF3-220ENST00000598108 PRDM5Q9NQX1 630 aaPredicted RBP26.17■■□□□ 1.78
IRF3-220ENST00000598108 SORBS3O60504 671 aa26.16■■□□□ 1.78
IRF3-220ENST00000598108 AKAP17AQ02040 695 aaKnown RBP26.16■■□□□ 1.78
IRF3-220ENST00000598108 XRRA1Q6P2D8 792 aa26.16■■□□□ 1.78
IRF3-220ENST00000598108 KCNV1Q6PIU1 500 aa26.16■■□□□ 1.78
IRF3-220ENST00000598108 PGBD1Q96JS3 809 aa26.16■■□□□ 1.78
IRF3-220ENST00000598108 POLR3EQ9NVU0 708 aa26.16■■□□□ 1.78
IRF3-220ENST00000598108 TMEM260Q9NX78 707 aa26.16■■□□□ 1.78
IRF3-220ENST00000598108 SPDYE3A6NKU9 549 aa26.15■■□□□ 1.78
IRF3-220ENST00000598108 SPATA31C2B4DYI2 1134 aa26.15■■□□□ 1.78
IRF3-220ENST00000598108 STAM2O75886 525 aa26.15■■□□□ 1.78
IRF3-220ENST00000598108 CLTBP09497 229 aa26.15■■□□□ 1.78
IRF3-220ENST00000598108 TGFB3P10600 412 aa26.15■■□□□ 1.78
IRF3-220ENST00000598108 UBA1P22314 1058 aaKnown RBP26.15■■□□□ 1.78
IRF3-220ENST00000598108 ITGB8P26012 769 aa26.15■■□□□ 1.78
IRF3-220ENST00000598108 ICAM3P32942 547 aa26.15■■□□□ 1.78
IRF3-220ENST00000598108 MDM2Q00987 491 aaPredicted RBP26.15■■□□□ 1.78
IRF3-220ENST00000598108 SCRN1Q12765 414 aa26.15■■□□□ 1.78
IRF3-220ENST00000598108 BRDTQ58F21 947 aaPredicted RBP26.15■■□□□ 1.78
IRF3-220ENST00000598108 CELF3Q5SZQ8 465 aaKnown RBP26.15■■□□□ 1.78
IRF3-220ENST00000598108 MYSM1Q5VVJ2 828 aa26.15■■□□□ 1.78
IRF3-220ENST00000598108 DHX37Q8IY37 1157 aaKnown RBP26.15■■□□□ 1.78
IRF3-220ENST00000598108 EMID1Q96A84 441 aaPredicted RBP26.15■■□□□ 1.78
IRF3-220ENST00000598108 MTG1Q9BT17 334 aaPredicted RBP26.15■■□□□ 1.78
IRF3-220ENST00000598108 DCDC2CA8MYV0 355 aa26.14■■□□□ 1.78
IRF3-220ENST00000598108 GGPS1O95749 300 aa26.14■■□□□ 1.78
IRF3-220ENST00000598108 MMP3P08254 477 aa26.14■■□□□ 1.78
IRF3-220ENST00000598108 CLK2P49760 499 aaKnown RBP26.14■■□□□ 1.78
IRF3-220ENST00000598108 NEK4P51957 841 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms