RNA–Protein interactions for RNA: ENST00000597333.1

PAFAH1B3-206, Transcript of platelet activating factor acetylhydrolase 1b catalytic subunit 3, humanhuman

TSL 2

Gene PAFAH1B3, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAFAH1B3-206ENST00000597333 HMGB1P09429 215 aaKnown RBP16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 APOBRQ0VD83 1088 aa16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 CCDC62Q6P9F0 684 aa16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 USP17L6PQ6QN14 398 aa16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 BLOC1S2Q6QNY1 142 aa16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 HEATR3Q7Z4Q2 680 aa16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 FAM126BQ8IXS8 530 aa16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 GPKOWQ92917 476 aaPredicted RBP eCLIP16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 KCNB2Q92953 911 aa16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 TOX2Q96NM4 488 aa16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 PPP1R12CQ9BZL4 782 aa16.9■□□□□ 0.3
PAFAH1B3-206ENST00000597333 TLR3O15455 904 aaKnown RBP16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 GH1P01241 217 aa16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 CASTP20810 708 aaKnown RBP16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 CCND2P30279 289 aa16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 PURAQ00577 322 aaKnown RBP16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 BRDTQ58F21 947 aaPredicted RBP16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 SAMD3Q8N6K7 520 aa16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 AFG1LQ8WV93 481 aa16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 BRF1Q92994 677 aa16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 CUL5Q93034 780 aa16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 POLR3EQ9NVU0 708 aa16.89■□□□□ 0.29
PAFAH1B3-206ENST00000597333 RPS6KB1P23443 525 aa16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 ARHGAP1Q07960 439 aa16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 UBE2SQ16763 222 aa16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 FAM47CQ5HY64 1035 aa16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 C9orf50Q5SZB4 431 aa16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 VSIG10LQ86VR7 867 aa16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 MTG1Q9BT17 334 aaPredicted RBP16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 TRPV6Q9H1D0 765 aa16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 RBM28Q9NW13 759 aaKnown RBP16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 RTEL1Q9NZ71 1219 aa16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 DDX41Q9UJV9 622 aaKnown RBP16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 TBX21Q9UL17 535 aa16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 CNTNAP5Q8WYK1 1306 aa16.88■□□□□ 0.29
PAFAH1B3-206ENST00000597333 A6NJR5 290 aa16.87■□□□□ 0.29
PAFAH1B3-206ENST00000597333 MEIS2O14770 477 aa16.87■□□□□ 0.29
PAFAH1B3-206ENST00000597333 B4GALT4O60513 344 aa16.87■□□□□ 0.29
PAFAH1B3-206ENST00000597333 RGS20O76081 388 aa16.87■□□□□ 0.29
PAFAH1B3-206ENST00000597333 MMP3P08254 477 aa16.87■□□□□ 0.29
PAFAH1B3-206ENST00000597333 CDC27P30260 824 aa16.87■□□□□ 0.29
PAFAH1B3-206ENST00000597333 EPHB4P54760 987 aa16.87■□□□□ 0.29
PAFAH1B3-206ENST00000597333 SHHQ15465 462 aa16.87■□□□□ 0.29
PAFAH1B3-206ENST00000597333 DHX37Q8IY37 1157 aaKnown RBP16.87■□□□□ 0.29
PAFAH1B3-206ENST00000597333 PSTPIP2Q9H939 334 aa16.87■□□□□ 0.29
PAFAH1B3-206ENST00000597333 TIMP1P01033 207 aa16.86■□□□□ 0.29
PAFAH1B3-206ENST00000597333 CD4P01730 458 aa16.86■□□□□ 0.29
PAFAH1B3-206ENST00000597333 METAP2P50579 478 aaKnown RBP eCLIP16.86■□□□□ 0.29
PAFAH1B3-206ENST00000597333 FPGSQ05932 587 aa16.86■□□□□ 0.29
PAFAH1B3-206ENST00000597333 WWC2Q6AWC2 1192 aa16.86■□□□□ 0.29
PAFAH1B3-206ENST00000597333 SLC43A3Q8NBI5 491 aa16.86■□□□□ 0.29
PAFAH1B3-206ENST00000597333 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
PAFAH1B3-206ENST00000597333 FAM217BQ9NTX9 383 aaPredicted RBP16.86■□□□□ 0.29
PAFAH1B3-206ENST00000597333 TRMT13Q9NUP7 481 aaKnown RBP16.86■□□□□ 0.29
PAFAH1B3-206ENST00000597333 V9GY48 417 aaPredicted RBP16.86■□□□□ 0.29
PAFAH1B3-206ENST00000597333 PPFIA3O75145 1194 aa16.85■□□□□ 0.29
PAFAH1B3-206ENST00000597333 GGPS1O95749 300 aa16.85■□□□□ 0.29
PAFAH1B3-206ENST00000597333 PSMA5P28066 241 aa16.85■□□□□ 0.29
PAFAH1B3-206ENST00000597333 CYP2C18P33260 490 aa16.85■□□□□ 0.29
PAFAH1B3-206ENST00000597333 ADD1P35611 737 aaKnown RBP16.85■□□□□ 0.29
PAFAH1B3-206ENST00000597333 NAPAP54920 295 aa16.85■□□□□ 0.29
PAFAH1B3-206ENST00000597333 MRPS9P82933 396 aaKnown RBP16.85■□□□□ 0.29
PAFAH1B3-206ENST00000597333 NBPF20Q3BBV1 942 aa16.85■□□□□ 0.29
PAFAH1B3-206ENST00000597333 ALDH8A1Q9H2A2 487 aaPredicted RBP16.85■□□□□ 0.29
PAFAH1B3-206ENST00000597333 UMODL1Q5DID0 1318 aa16.85■□□□□ 0.29
PAFAH1B3-206ENST00000597333 PIK3CDO00329 1044 aa16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 KPNA6O60684 536 aa16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 CYP2C9P11712 490 aa16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 UBA1P22314 1058 aaKnown RBP16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 SP2Q02086 613 aa16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 FUT2Q10981 343 aa16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 LRIT3Q3SXY7 679 aa16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 TYW1BQ6NUM6 668 aa16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 LARP6Q9BRS8 491 aaKnown RBP16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 UPF3BQ9BZI7 483 aaKnown RBP16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 HIPK3Q9H422 1215 aa16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 FRMPD4Q14CM0 1322 aa16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 MYH7BA7E2Y1 1941 aa16.84■□□□□ 0.29
PAFAH1B3-206ENST00000597333 LAMA3Q16787 3333 aa16.83■□□□□ 0.29
PAFAH1B3-206ENST00000597333 SZT2Q5T011 3432 aa16.83■□□□□ 0.29
PAFAH1B3-206ENST00000597333 ZNF286BP0CG31 522 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 CSF2RAP15509 400 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 CCL23P55773 120 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 LAMC2Q13753 1193 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 DGKDQ16760 1214 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 GNPTABQ3T906 1256 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 MFSD5Q6N075 450 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 RUFY3Q7L099 469 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 SPATA33Q96N06 139 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 BCAS3Q9H6U6 928 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 MLXIPQ9HAP2 919 aa16.83■□□□□ 0.28
PAFAH1B3-206ENST00000597333 SPDYE3A6NKU9 549 aa16.82■□□□□ 0.28
PAFAH1B3-206ENST00000597333 ACRP10323 421 aa16.82■□□□□ 0.28
PAFAH1B3-206ENST00000597333 CCT2P78371 535 aaKnown RBP16.82■□□□□ 0.28
PAFAH1B3-206ENST00000597333 HSDL1Q3SXM5 330 aa16.82■□□□□ 0.28
PAFAH1B3-206ENST00000597333 CELF3Q5SZQ8 465 aaKnown RBP16.82■□□□□ 0.28
PAFAH1B3-206ENST00000597333 MYSM1Q5VVJ2 828 aa16.82■□□□□ 0.28
PAFAH1B3-206ENST00000597333 PCNX4Q63HM2 1172 aa16.82■□□□□ 0.28
PAFAH1B3-206ENST00000597333 KCNV1Q6PIU1 500 aa16.82■□□□□ 0.28
PAFAH1B3-206ENST00000597333 TMEM199Q8N511 208 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms