RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 MSCO60682 206 aa16.4■□□□□ 0.22
VRK3-213ENST00000597215 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
VRK3-213ENST00000597215 AKR1A1P14550 325 aa16.4■□□□□ 0.22
VRK3-213ENST00000597215 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
VRK3-213ENST00000597215 BECN1Q14457 450 aa16.4■□□□□ 0.22
VRK3-213ENST00000597215 KRT25Q7Z3Z0 450 aa16.4■□□□□ 0.22
VRK3-213ENST00000597215 FBXO18Q8NFZ0 1043 aa16.4■□□□□ 0.22
VRK3-213ENST00000597215 PAK6Q9NQU5 681 aaPredicted RBP16.4■□□□□ 0.22
VRK3-213ENST00000597215 FAM184BQ9ULE4 1060 aa16.4■□□□□ 0.22
VRK3-213ENST00000597215 MYH7BA7E2Y1 1941 aa16.39■□□□□ 0.21
VRK3-213ENST00000597215 MRPS9P82933 396 aaKnown RBP16.39■□□□□ 0.21
VRK3-213ENST00000597215 ARHGAP4P98171 946 aa16.39■□□□□ 0.21
VRK3-213ENST00000597215 CCDC144BQ3MJ40 725 aa16.39■□□□□ 0.21
VRK3-213ENST00000597215 GNPTABQ3T906 1256 aa16.39■□□□□ 0.21
VRK3-213ENST00000597215 TAPT1Q6NXT6 567 aa16.39■□□□□ 0.21
VRK3-213ENST00000597215 DIS3L2Q8IYB7 885 aaKnown RBP16.39■□□□□ 0.21
VRK3-213ENST00000597215 SCFD2Q8WU76 684 aa16.39■□□□□ 0.21
VRK3-213ENST00000597215 TMEM106CQ9BVX2 250 aa16.39■□□□□ 0.21
VRK3-213ENST00000597215 DDX20Q9UHI6 824 aaKnown RBP16.39■□□□□ 0.21
VRK3-213ENST00000597215 CCDC194A0A1B0GVG4 234 aa16.38■□□□□ 0.21
VRK3-213ENST00000597215 RBM47A0AV96 593 aaKnown RBP16.38■□□□□ 0.21
VRK3-213ENST00000597215 H3BQV1 296 aa16.38■□□□□ 0.21
VRK3-213ENST00000597215 PDCP20941 246 aa16.38■□□□□ 0.21
VRK3-213ENST00000597215 NONOQ15233 471 aaKnown RBP eCLIP16.38■□□□□ 0.21
VRK3-213ENST00000597215 IQSEC1Q6DN90 963 aa16.38■□□□□ 0.21
VRK3-213ENST00000597215 OXER1Q8TDS5 423 aa16.38■□□□□ 0.21
VRK3-213ENST00000597215 PDGFCQ9NRA1 345 aa16.38■□□□□ 0.21
VRK3-213ENST00000597215 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
VRK3-213ENST00000597215 FRMPD3Q5JV73 1810 aa16.38■□□□□ 0.21
VRK3-213ENST00000597215 BTBD18B2RXH4 712 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 GJB1P08034 283 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 CYP3A4P08684 503 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 RARBP10826 455 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 ADCYAP1R1P41586 468 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 TNFAIP2Q03169 654 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 NR5A1Q13285 461 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 TTLL4Q14679 1199 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 LARP1BQ659C4 914 aaKnown RBP16.37■□□□□ 0.21
VRK3-213ENST00000597215 KCNV1Q6PIU1 500 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 SEPT14Q6ZU15 432 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 NLRX1Q86UT6 975 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 TBCKQ8TEA7 893 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 CRYGNQ8WXF5 182 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 INPP4AQ96PE3 977 aaPredicted RBP16.37■□□□□ 0.21
VRK3-213ENST00000597215 DEFB118Q96PH6 123 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 WDR11Q9BZH6 1224 aa16.37■□□□□ 0.21
VRK3-213ENST00000597215 NKRFO15226 690 aaKnown RBP eCLIP16.36■□□□□ 0.21
VRK3-213ENST00000597215 RGS20O76081 388 aa16.36■□□□□ 0.21
VRK3-213ENST00000597215 ZNF76P36508 570 aa16.36■□□□□ 0.21
VRK3-213ENST00000597215 GNL2Q13823 731 aaKnown RBP16.36■□□□□ 0.21
VRK3-213ENST00000597215 PIK3AP1Q6ZUJ8 805 aa16.36■□□□□ 0.21
VRK3-213ENST00000597215 TNFRSF25Q93038 417 aa16.36■□□□□ 0.21
VRK3-213ENST00000597215 GPRASP2Q96D09 838 aa16.36■□□□□ 0.21
VRK3-213ENST00000597215 ZFP91Q96JP5 570 aaPredicted RBP16.36■□□□□ 0.21
VRK3-213ENST00000597215 FOXP1Q9H334 677 aaPredicted RBP16.36■□□□□ 0.21
VRK3-213ENST00000597215 RTEL1Q9NZ71 1219 aa16.36■□□□□ 0.21
VRK3-213ENST00000597215 UBIAD1Q9Y5Z9 338 aa16.36■□□□□ 0.21
VRK3-213ENST00000597215 MRVI1Q9Y6F6 885 aa16.36■□□□□ 0.21
VRK3-213ENST00000597215 BRCA2P51587 3418 aa16.36■□□□□ 0.21
VRK3-213ENST00000597215 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.35■□□□□ 0.21
VRK3-213ENST00000597215 FIBPO43427 364 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 DUSP11O75319 330 aaKnown RBP16.35■□□□□ 0.21
VRK3-213ENST00000597215 TXNP10599 105 aaKnown RBP16.35■□□□□ 0.21
VRK3-213ENST00000597215 CAPN2P17655 700 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 ICAM3P32942 547 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 GJA8P48165 433 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 USP11P51784 963 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 DUSP28Q4G0W2 176 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 CEP55Q53EZ4 464 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 ANO1Q5XXA6 986 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 LHX8Q68G74 356 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 NIPA1Q7RTP0 329 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 U2AF1L4Q8WU68 220 aaKnown RBP16.35■□□□□ 0.21
VRK3-213ENST00000597215 CDHR1Q96JP9 859 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 MXRA8Q9BRK3 442 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 JADE2Q9NQC1 790 aa16.35■□□□□ 0.21
VRK3-213ENST00000597215 KIAA0100Q14667 2235 aaKnown RBP16.35■□□□□ 0.21
VRK3-213ENST00000597215 CCDC85CA6NKD9 419 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 ADCY6O43306 1168 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 ARIH2O95376 493 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 SGPL1O95470 568 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 TGFB3P10600 412 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 SMPD1P17405 629 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 ITGB5P18084 799 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 CIITAP33076 1130 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 MTMR1Q13613 665 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 INF2Q27J81 1249 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 CCDC62Q6P9F0 684 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 LENG1Q96BZ8 264 aaPredicted RBP16.34■□□□□ 0.21
VRK3-213ENST00000597215 CRISPLD2Q9H0B8 497 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 XPNPEP3Q9NQH7 507 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 GNEQ9Y223 722 aaKnown RBP16.34■□□□□ 0.21
VRK3-213ENST00000597215 Q9Y3F1 56 aa16.34■□□□□ 0.21
VRK3-213ENST00000597215 SPATA31C2B4DYI2 1134 aa16.33■□□□□ 0.2
VRK3-213ENST00000597215 MEIS1O00470 390 aa16.33■□□□□ 0.2
VRK3-213ENST00000597215 MAFGO15525 162 aa16.33■□□□□ 0.2
VRK3-213ENST00000597215 U2AF2P26368 475 aaKnown RBP eCLIP16.33■□□□□ 0.2
VRK3-213ENST00000597215 SETQ01105 290 aaPredicted RBP16.33■□□□□ 0.2
VRK3-213ENST00000597215 LY6KQ17RY6 165 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms