RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 GPM6BQ13491 265 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 RPAINQ86UA6 219 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 SESTD1Q86VW0 696 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 RNF135Q8IUD6 432 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 MYOCDQ8IZQ8 938 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 SP7Q8TDD2 431 aaPredicted RBP18.33■□□□□ 0.52
LIG1-214ENST00000597146 KAT2BQ92831 832 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 OSBP2Q969R2 916 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 NSUN3Q9H649 340 aaKnown RBP18.33■□□□□ 0.52
LIG1-214ENST00000597146 ZNF287Q9HBT7 754 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 MYH7BA7E2Y1 1941 aa18.33■□□□□ 0.52
LIG1-214ENST00000597146 LOC102724159A0A0B4J2E5 919 aa18.32■□□□□ 0.52
LIG1-214ENST00000597146 H3BNC9 293 aa18.32■□□□□ 0.52
LIG1-214ENST00000597146 GFRA3O60609 400 aa18.32■□□□□ 0.52
LIG1-214ENST00000597146 EFCAB14O75071 495 aa18.32■□□□□ 0.52
LIG1-214ENST00000597146 PARNO95453 639 aaKnown RBP18.32■□□□□ 0.52
LIG1-214ENST00000597146 MMP3P08254 477 aa18.32■□□□□ 0.52
LIG1-214ENST00000597146 TFAP4Q01664 338 aa18.32■□□□□ 0.52
LIG1-214ENST00000597146 PWP2Q15269 919 aaKnown RBP18.32■□□□□ 0.52
LIG1-214ENST00000597146 SMAD2Q15796 467 aaKnown RBP18.32■□□□□ 0.52
LIG1-214ENST00000597146 ZNF618Q5T7W0 954 aa18.32■□□□□ 0.52
LIG1-214ENST00000597146 RCSD1Q6JBY9 416 aa18.32■□□□□ 0.52
LIG1-214ENST00000597146 AFG1LQ8WV93 481 aa18.32■□□□□ 0.52
LIG1-214ENST00000597146 GTF2IRD1Q9UHL9 959 aa18.32■□□□□ 0.52
LIG1-214ENST00000597146 EDNRBP24530 442 aa18.31■□□□□ 0.52
LIG1-214ENST00000597146 SLC16A2P36021 539 aa18.31■□□□□ 0.52
LIG1-214ENST00000597146 PDE4BQ07343 736 aa18.31■□□□□ 0.52
LIG1-214ENST00000597146 DLX2Q07687 328 aaPredicted RBP18.31■□□□□ 0.52
LIG1-214ENST00000597146 MKRN4PQ13434 485 aaPredicted RBP18.31■□□□□ 0.52
LIG1-214ENST00000597146 TRIM71Q2Q1W2 868 aaKnown RBP18.31■□□□□ 0.52
LIG1-214ENST00000597146 RANBP17Q9H2T7 1088 aaKnown RBP18.31■□□□□ 0.52
LIG1-214ENST00000597146 HDAC6Q9UBN7 1215 aa18.31■□□□□ 0.52
LIG1-214ENST00000597146 STX8Q9UNK0 236 aa18.31■□□□□ 0.52
LIG1-214ENST00000597146 TMEM221A6NGB7 291 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 M0R296 226 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 GPAA1O43292 621 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 MBTPS2O43462 519 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 NMT2O60551 498 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 HMMRO75330 724 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 LGR5O75473 907 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 AMHP03971 560 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 CCDC96Q2M329 555 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 TTBK2Q6IQ55 1244 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 EDAQ92838 391 aa18.3■□□□□ 0.52
LIG1-214ENST00000597146 M0R2C6 588 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 APPP05067 770 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 RNF207Q6ZRF8 634 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 CHST3Q7LGC8 479 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 FBXO11Q86XK2 927 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 TMEM192Q8IY95 271 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 CLEC4DQ8WXI8 215 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 PBXIP1Q96AQ6 731 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 SAMD11Q96NU1 681 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 POP1Q99575 1024 aaKnown RBP18.29■□□□□ 0.52
LIG1-214ENST00000597146 ALG1Q9BT22 464 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 ALG13Q9NP73 1137 aaKnown RBP18.29■□□□□ 0.52
LIG1-214ENST00000597146 DCHS1Q96JQ0 3298 aa18.29■□□□□ 0.52
LIG1-214ENST00000597146 DMDP11532 3685 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 PTPRZ1P23471 2315 aaPredicted RBP18.28■□□□□ 0.52
LIG1-214ENST00000597146 TBX10O75333 385 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 RPS6P62753 249 aaKnown RBP18.28■□□□□ 0.52
LIG1-214ENST00000597146 ZNF200P98182 395 aaPredicted RBP18.28■□□□□ 0.52
LIG1-214ENST00000597146 ARHGAP1Q07960 439 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 TRIM67Q6ZTA4 783 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 BMP8AQ7Z5Y6 402 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 SIRT2Q8IXJ6 389 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 C7orf31Q8N865 590 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 DBF4BQ8NFT6 615 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 APPBP2Q92624 585 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 YME1L1Q96TA2 773 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 IL17RBQ9NRM6 502 aa18.28■□□□□ 0.52
LIG1-214ENST00000597146 CSPG5O95196 566 aa18.27■□□□□ 0.52
LIG1-214ENST00000597146 HYAL1Q12794 435 aa18.27■□□□□ 0.52
LIG1-214ENST00000597146 PTK7Q13308 1070 aa18.27■□□□□ 0.52
LIG1-214ENST00000597146 LY6KQ17RY6 165 aa18.27■□□□□ 0.52
LIG1-214ENST00000597146 CTC1Q2NKJ3 1217 aa18.27■□□□□ 0.52
LIG1-214ENST00000597146 CCDC62Q6P9F0 684 aa18.27■□□□□ 0.52
LIG1-214ENST00000597146 SUGP1Q8IWZ8 645 aaKnown RBP18.27■□□□□ 0.52
LIG1-214ENST00000597146 IFNL3Q8IZI9 196 aa18.27■□□□□ 0.52
LIG1-214ENST00000597146 KIAA1671Q9BY89 1806 aa18.27■□□□□ 0.52
LIG1-214ENST00000597146 RIF1Q5UIP0 2472 aaKnown RBP18.27■□□□□ 0.51
LIG1-214ENST00000597146 STXBP3O00186 592 aa18.26■□□□□ 0.51
LIG1-214ENST00000597146 UPP2O95045 317 aa18.26■□□□□ 0.51
LIG1-214ENST00000597146 ZNF286BP0CG31 522 aa18.26■□□□□ 0.51
LIG1-214ENST00000597146 GTF2F1P35269 517 aaKnown RBP eCLIP18.26■□□□□ 0.51
LIG1-214ENST00000597146 PSEN2P49810 448 aa18.26■□□□□ 0.51
LIG1-214ENST00000597146 FOXK2Q01167 660 aa18.26■□□□□ 0.51
LIG1-214ENST00000597146 SMAD4Q13485 552 aaKnown RBP18.26■□□□□ 0.51
LIG1-214ENST00000597146 SYDE2Q5VT97 1194 aa18.26■□□□□ 0.51
LIG1-214ENST00000597146 MPHOSPH6Q99547 160 aaKnown RBP18.26■□□□□ 0.51
LIG1-214ENST00000597146 FRMPD2Q68DX3 1309 aaPredicted RBP18.25■□□□□ 0.51
LIG1-214ENST00000597146 VPS13AQ96RL7 3174 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 LINC01565O15544 149 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 RAB11FIP3O75154 756 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 GH1P01241 217 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 VCPP55072 806 aaKnown RBP18.25■□□□□ 0.51
LIG1-214ENST00000597146 PPARAQ07869 468 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 HIC1Q14526 733 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 MFSD10Q14728 455 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 SEPT14Q6ZU15 432 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms