RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 CNTN2Q02246 1040 aa16.6■□□□□ 0.25
VRK3-212ENST00000596814 GRIN1Q05586 938 aa16.6■□□□□ 0.25
VRK3-212ENST00000596814 SKOR2Q2VWA4 1001 aaPredicted RBP16.6■□□□□ 0.25
VRK3-212ENST00000596814 C17orf99Q6UX52 265 aa16.6■□□□□ 0.25
VRK3-212ENST00000596814 GPT2Q8TD30 523 aa16.6■□□□□ 0.25
VRK3-212ENST00000596814 ADD3Q9UEY8 706 aaKnown RBP16.6■□□□□ 0.25
VRK3-212ENST00000596814 LRRC37A2A6NM11 1700 aa16.6■□□□□ 0.25
VRK3-212ENST00000596814 ZNF236Q9UL36 1845 aa16.6■□□□□ 0.25
VRK3-212ENST00000596814 IGLV3-22A0A075B6J6 115 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 TRAK2O60296 914 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 CCND2P30279 289 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 HTRA3P83110 453 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 SETQ01105 290 aaPredicted RBP16.59■□□□□ 0.25
VRK3-212ENST00000596814 CEP55Q53EZ4 464 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 XRRA1Q6P2D8 792 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 DTHD1Q6ZMT9 781 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 FAM133AQ8N9E0 248 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 ZNF579Q8NAF0 562 aaKnown RBP16.59■□□□□ 0.25
VRK3-212ENST00000596814 MRPS27Q92552 414 aaKnown RBP16.59■□□□□ 0.25
VRK3-212ENST00000596814 LENG9Q96B70 501 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 MTMR9Q96QG7 549 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 IVNS1ABPQ9Y6Y0 642 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 PLXNA1Q9UIW2 1896 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 DNAJC25-GNG10A0A024R161 153 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 MARCH6O60337 910 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 NR3C2P08235 984 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 MYCLP12524 364 aaPredicted RBP16.59■□□□□ 0.25
VRK3-212ENST00000596814 ALDH5A1P51649 535 aaPredicted RBP16.59■□□□□ 0.25
VRK3-212ENST00000596814 IL17AQ16552 155 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 KLHL40Q2TBA0 621 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 GPR142Q7Z601 462 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 ABRAQ8N0Z2 381 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 CYP2W1Q8TAV3 490 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 MXRA8Q9BRK3 442 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 CSRNP2Q9H175 543 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 KCNMB3Q9NPA1 279 aa16.59■□□□□ 0.25
VRK3-212ENST00000596814 ASTN1O14525 1302 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 TBX3O15119 743 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 STRNO43815 780 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 PGK2P07205 417 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 CMA1P23946 247 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 MAP2K2P36507 400 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 VEGFBP49765 207 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 MRPS9P82933 396 aaKnown RBP16.58■□□□□ 0.24
VRK3-212ENST00000596814 RESP18Q5W5W9 173 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 SHC4Q6S5L8 630 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 PLEKHH3Q7Z736 793 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 PLA2G4DQ86XP0 818 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 ETNPPLQ8TBG4 499 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 ZFP91Q96JP5 570 aaPredicted RBP16.58■□□□□ 0.24
VRK3-212ENST00000596814 IWS1Q96ST2 819 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 UBIAD1Q9Y5Z9 338 aa16.58■□□□□ 0.24
VRK3-212ENST00000596814 SOWAHBA6NEL2 793 aa16.57■□□□□ 0.24
VRK3-212ENST00000596814 MEIS1O00470 390 aa16.57■□□□□ 0.24
VRK3-212ENST00000596814 ADORA2AP29274 412 aa16.57■□□□□ 0.24
VRK3-212ENST00000596814 LONP1P36776 959 aaKnown RBP16.57■□□□□ 0.24
VRK3-212ENST00000596814 TXKP42681 527 aa16.57■□□□□ 0.24
VRK3-212ENST00000596814 TMEM266Q2M3C6 531 aa16.57■□□□□ 0.24
VRK3-212ENST00000596814 NIPA1Q7RTP0 329 aa16.57■□□□□ 0.24
VRK3-212ENST00000596814 VSIG10LQ86VR7 867 aa16.57■□□□□ 0.24
VRK3-212ENST00000596814 SLFN12Q8IYM2 578 aa16.57■□□□□ 0.24
VRK3-212ENST00000596814 HAS1Q92839 578 aa16.57■□□□□ 0.24
VRK3-212ENST00000596814 GOLPH3LQ9H4A5 285 aa16.57■□□□□ 0.24
VRK3-212ENST00000596814 A0A1B0GVL5 298 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 MSH4O15457 936 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 ITGB5P18084 799 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 LIG1P18858 919 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 GRB14Q14449 540 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 SPECC1Q5M775 1068 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 FAM20AQ96MK3 541 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 MPHOSPH6Q99547 160 aaKnown RBP16.56■□□□□ 0.24
VRK3-212ENST00000596814 JADE2Q9NQC1 790 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 KIAA1217Q5T5P2 1943 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 B4DLN1 442 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 STAM2O75886 525 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 PFKFB1P16118 471 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.24
VRK3-212ENST00000596814 FGD4Q96M96 766 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 RAB34Q9BZG1 259 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 TTC12Q9H892 705 aaPredicted RBP16.56■□□□□ 0.24
VRK3-212ENST00000596814 FAM13BQ9NYF5 915 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 MGAMO43451 1857 aa16.56■□□□□ 0.24
VRK3-212ENST00000596814 EDNRBP24530 442 aa16.55■□□□□ 0.24
VRK3-212ENST00000596814 TECP42680 631 aa16.55■□□□□ 0.24
VRK3-212ENST00000596814 FAM160A1Q05DH4 1040 aa16.55■□□□□ 0.24
VRK3-212ENST00000596814 MTMR1Q13613 665 aa16.55■□□□□ 0.24
VRK3-212ENST00000596814 STXBP2Q15833 593 aa16.55■□□□□ 0.24
VRK3-212ENST00000596814 NLRX1Q86UT6 975 aa16.55■□□□□ 0.24
VRK3-212ENST00000596814 SYMPKQ92797 1274 aaKnown RBP16.55■□□□□ 0.24
VRK3-212ENST00000596814 GJA10Q969M2 543 aa16.55■□□□□ 0.24
VRK3-212ENST00000596814 AK8Q96MA6 479 aa16.55■□□□□ 0.24
VRK3-212ENST00000596814 UIMC1Q96RL1 719 aa16.55■□□□□ 0.24
VRK3-212ENST00000596814 WDR11Q9BZH6 1224 aa16.55■□□□□ 0.24
VRK3-212ENST00000596814 MCM3APO60318 1980 aa16.54■□□□□ 0.24
VRK3-212ENST00000596814 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
VRK3-212ENST00000596814 FAM237AA0A1B0GTK4 181 aa16.54■□□□□ 0.24
VRK3-212ENST00000596814 SLC15A5A6NIM6 579 aa16.54■□□□□ 0.24
VRK3-212ENST00000596814 ARP10275 920 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms