RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 GLI1P08151 1106 aa19.23■□□□□ 0.67
ARHGEF1-213ENST00000595897 GUCY2FP51841 1108 aa19.23■□□□□ 0.67
ARHGEF1-213ENST00000595897 C12orf60Q5U649 245 aa19.23■□□□□ 0.67
ARHGEF1-213ENST00000595897 ACSBG1Q96GR2 724 aa19.23■□□□□ 0.67
ARHGEF1-213ENST00000595897 VAT1LQ9HCJ6 419 aa19.23■□□□□ 0.67
ARHGEF1-213ENST00000595897 TSKSQ9UJT2 592 aa19.23■□□□□ 0.67
ARHGEF1-213ENST00000595897 GNA11P29992 359 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 PAK2Q13177 524 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 FBXW10Q5XX13 1052 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 TMED8Q6PL24 325 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 B4GALNT4Q76KP1 1039 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 CCDC155Q8N6L0 562 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 TBCKQ8TEA7 893 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 KAT2BQ92831 832 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 MMTAG2Q9BU76 263 aaKnown RBP19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 ZMYND12Q9H0C1 365 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 MYH10P35580 1976 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 ZSCAN5CA6NGD5 496 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 MYMKA6NI61 221 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 H0YHG0 523 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 RNASE9P60153 205 aaKnown RBP19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 SKOR1P84550 965 aa19.22■□□□□ 0.67
ARHGEF1-213ENST00000595897 LOC102724428A0A0B4J2F2 783 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 SIK1P57059 783 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 SLC9C1Q4G0N8 1177 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 PDXDC1Q6P996 788 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 RNF10Q8N5U6 811 aaKnown RBP19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 SLC44A5Q8NCS7 719 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 BAP1Q92560 729 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 TMEM47Q9BQJ4 181 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 STRCP1A6NGW2 1772 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 PJA2O43164 708 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 FAM153BP0C7A2 387 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 TNFRSF8P28908 595 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 FAM153CQ494X1 144 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 UNC13DQ70J99 1090 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 LARP4BQ92615 738 aaKnown RBP19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 TSG101Q99816 390 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 LUC7LQ9NQ29 371 aaKnown RBP19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 SEC63Q9UGP8 760 aaKnown RBP19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 FAM153AQ9UHL3 310 aa19.21■□□□□ 0.67
ARHGEF1-213ENST00000595897 FTCDO95954 541 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 LRRC41Q15345 812 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 SUGP1Q8IWZ8 645 aaKnown RBP19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 GUF1Q8N442 669 aaKnown RBP19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 OTUD6BQ8N6M0 293 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 BIN2Q9UBW5 565 aaPredicted RBP19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 PALMO75781 387 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 MNAT1P51948 309 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 LRRC63Q05C16 580 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 SF3B3Q15393 1217 aaKnown RBP19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 ENOX2Q16206 610 aaKnown RBP19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 COBLL1Q53SF7 1204 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 KRT12Q99456 494 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 RNF14Q9UBS8 474 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 PALM3A6NDB9 673 aaPredicted RBP19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 GUCY1A3Q02108 690 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 ARID5AQ03989 594 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 SF3B2Q13435 895 aaKnown RBP19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 ANKS1AQ92625 1134 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 COL4A1P02462 1669 aa19.2■□□□□ 0.66
ARHGEF1-213ENST00000595897 NHSL1Q5SYE7 1610 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 PVALEFA0A1B0GWK0 134 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 SSU72P8A0A1W2PR75 194 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 ITPK1Q13572 414 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 CCDC40Q4G0X9 1142 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 MCTP2Q6DN12 878 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 LZTS2Q9BRK4 669 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 ZNF233A6NK53 670 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 GRB10Q13322 594 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 CALCRLQ16602 461 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 SFMBT2Q5VUG0 894 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 RNPC3Q96LT9 517 aaKnown RBP19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 BLOC1S4Q9NUP1 217 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 CAPN7Q9Y6W3 813 aa19.19■□□□□ 0.66
ARHGEF1-213ENST00000595897 APBA1Q02410 837 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 TMEM266Q2M3C6 531 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 ASTE1Q2TB18 679 aaPredicted RBP19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 MAATS1Q7Z4T9 603 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 IQCKQ8N0W5 287 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 REXO1Q8N1G1 1221 aaKnown RBP19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 CENPHQ9H3R5 247 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 GDF3Q9NR23 364 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 STK17AQ9UEE5 414 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 PACSIN2Q9UNF0 486 aaPredicted RBP19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 NR1D1P20393 614 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 LSP1P33241 339 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 USP8P40818 1118 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 RPS8P62241 208 aaKnown RBP19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 EHHADHQ08426 723 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 ABCB11O95342 1321 aa19.18■□□□□ 0.66
ARHGEF1-213ENST00000595897 TRAF5O00463 557 aa19.17■□□□□ 0.66
ARHGEF1-213ENST00000595897 HNRNPH1P31943 449 aaKnown RBP19.17■□□□□ 0.66
ARHGEF1-213ENST00000595897 POLR2FP61218 127 aaKnown RBP19.17■□□□□ 0.66
ARHGEF1-213ENST00000595897 HGSNATQ68CP4 663 aa19.17■□□□□ 0.66
ARHGEF1-213ENST00000595897 USP17L2Q6R6M4 530 aa19.17■□□□□ 0.66
ARHGEF1-213ENST00000595897 SH3RF3Q8TEJ3 882 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF1-213ENST00000595897 HSPA2P54652 639 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms