RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 PURBQ96QR8 312 aaKnown RBP19.62■□□□□ 0.73
LTBP4-209ENST00000594116 AP5M1Q9H0R1 490 aa19.62■□□□□ 0.73
LTBP4-209ENST00000594116 RIOX1Q9H6W3 641 aa19.62■□□□□ 0.73
LTBP4-209ENST00000594116 PDGFCQ9NRA1 345 aa19.62■□□□□ 0.73
LTBP4-209ENST00000594116 TLR3O15455 904 aaKnown RBP19.61■□□□□ 0.73
LTBP4-209ENST00000594116 CYTH3O43739 400 aa19.61■□□□□ 0.73
LTBP4-209ENST00000594116 DHX16O60231 1041 aaKnown RBP19.61■□□□□ 0.73
LTBP4-209ENST00000594116 IFNAR1P17181 557 aa19.61■□□□□ 0.73
LTBP4-209ENST00000594116 ALDH5A1P51649 535 aaPredicted RBP19.61■□□□□ 0.73
LTBP4-209ENST00000594116 CXCL17Q6UXB2 119 aa19.61■□□□□ 0.73
LTBP4-209ENST00000594116 EEPD1Q7L9B9 569 aa19.61■□□□□ 0.73
LTBP4-209ENST00000594116 CCDC83Q8IWF9 413 aa19.61■□□□□ 0.73
LTBP4-209ENST00000594116 SLC43A3Q8NBI5 491 aa19.61■□□□□ 0.73
LTBP4-209ENST00000594116 CLEC4DQ8WXI8 215 aa19.61■□□□□ 0.73
LTBP4-209ENST00000594116 FAM161BQ96MY7 647 aa19.61■□□□□ 0.73
LTBP4-209ENST00000594116 SEZ6LQ9BYH1 1024 aa19.61■□□□□ 0.73
LTBP4-209ENST00000594116 UBA5Q9GZZ9 404 aa19.61■□□□□ 0.73
LTBP4-209ENST00000594116 RBM19Q9Y4C8 960 aaKnown RBP19.61■□□□□ 0.73
LTBP4-209ENST00000594116 PTPDC1A2A3K4 754 aa19.6■□□□□ 0.73
LTBP4-209ENST00000594116 DYNC1LI2O43237 492 aaPredicted RBP19.6■□□□□ 0.73
LTBP4-209ENST00000594116 ZEB2O60315 1214 aa19.6■□□□□ 0.73
LTBP4-209ENST00000594116 CTDNEP1O95476 244 aa19.6■□□□□ 0.73
LTBP4-209ENST00000594116 CD4P01730 458 aa19.6■□□□□ 0.73
LTBP4-209ENST00000594116 SLC30A10Q6XR72 485 aa19.6■□□□□ 0.73
LTBP4-209ENST00000594116 MTMR8Q96EF0 704 aa19.6■□□□□ 0.73
LTBP4-209ENST00000594116 CPVLQ9H3G5 476 aa19.6■□□□□ 0.73
LTBP4-209ENST00000594116 TMEM265A0A087WTH1 108 aa19.59■□□□□ 0.73
LTBP4-209ENST00000594116 PPIGQ13427 754 aaKnown RBP eCLIP19.59■□□□□ 0.73
LTBP4-209ENST00000594116 DUSP28Q4G0W2 176 aa19.59■□□□□ 0.73
LTBP4-209ENST00000594116 CPLX2Q6PUV4 134 aaKnown RBP19.59■□□□□ 0.73
LTBP4-209ENST00000594116 RNF207Q6ZRF8 634 aa19.59■□□□□ 0.73
LTBP4-209ENST00000594116 ADGRF4Q8IZF3 695 aa19.59■□□□□ 0.73
LTBP4-209ENST00000594116 CMTR1Q8N1G2 835 aaKnown RBP19.59■□□□□ 0.73
LTBP4-209ENST00000594116 LLPHQ9BRT6 129 aaKnown RBP19.59■□□□□ 0.73
LTBP4-209ENST00000594116 SEMA6BQ9H3T3 888 aa19.59■□□□□ 0.73
LTBP4-209ENST00000594116 EYSQ5T1H1 3165 aa19.59■□□□□ 0.73
LTBP4-209ENST00000594116 CPLX1O14810 134 aa19.58■□□□□ 0.72
LTBP4-209ENST00000594116 CDKL5O76039 1030 aa19.58■□□□□ 0.72
LTBP4-209ENST00000594116 PTGS1P23219 599 aa19.58■□□□□ 0.72
LTBP4-209ENST00000594116 ITGA7Q13683 1181 aa19.58■□□□□ 0.72
LTBP4-209ENST00000594116 TMEM199Q8N511 208 aa19.58■□□□□ 0.72
LTBP4-209ENST00000594116 NSUN7Q8NE18 718 aaKnown RBP19.58■□□□□ 0.72
LTBP4-209ENST00000594116 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.58■□□□□ 0.72
LTBP4-209ENST00000594116 RNF26Q9BY78 433 aaPredicted RBP19.58■□□□□ 0.72
LTBP4-209ENST00000594116 TTYH1Q9H313 450 aaPredicted RBP19.58■□□□□ 0.72
LTBP4-209ENST00000594116 JMJD4Q9H9V9 463 aa19.58■□□□□ 0.72
LTBP4-209ENST00000594116 BAZ2BQ9UIF8 2168 aaKnown RBP19.57■□□□□ 0.72
LTBP4-209ENST00000594116 GRIN2DO15399 1336 aa19.57■□□□□ 0.72
LTBP4-209ENST00000594116 STK36Q9NRP7 1315 aa19.57■□□□□ 0.72
LTBP4-209ENST00000594116 RBM47A0AV96 593 aaKnown RBP19.57■□□□□ 0.72
LTBP4-209ENST00000594116 EDNRBP24530 442 aa19.57■□□□□ 0.72
LTBP4-209ENST00000594116 CALML3P27482 149 aa19.57■□□□□ 0.72
LTBP4-209ENST00000594116 ANP32AP39687 249 aaKnown RBP19.57■□□□□ 0.72
LTBP4-209ENST00000594116 RPS6P62753 249 aaKnown RBP19.57■□□□□ 0.72
LTBP4-209ENST00000594116 BECN1Q14457 450 aa19.57■□□□□ 0.72
LTBP4-209ENST00000594116 TMEM63BQ5T3F8 832 aa19.57■□□□□ 0.72
LTBP4-209ENST00000594116 DNERQ8NFT8 737 aa19.57■□□□□ 0.72
LTBP4-209ENST00000594116 SMARCC2Q8TAQ2 1214 aa19.57■□□□□ 0.72
LTBP4-209ENST00000594116 MPHOSPH6Q99547 160 aaKnown RBP19.57■□□□□ 0.72
LTBP4-209ENST00000594116 CDX2Q99626 313 aaPredicted RBP19.57■□□□□ 0.72
LTBP4-209ENST00000594116 WDR11Q9BZH6 1224 aa19.57■□□□□ 0.72
LTBP4-209ENST00000594116 MAF1Q9H063 256 aa19.57■□□□□ 0.72
LTBP4-209ENST00000594116 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.56■□□□□ 0.72
LTBP4-209ENST00000594116 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.56■□□□□ 0.72
LTBP4-209ENST00000594116 DLL1O00548 723 aa19.56■□□□□ 0.72
LTBP4-209ENST00000594116 PRPF3O43395 683 aaKnown RBP19.56■□□□□ 0.72
LTBP4-209ENST00000594116 CSF2RAP15509 400 aa19.56■□□□□ 0.72
LTBP4-209ENST00000594116 CCDC82Q8N4S0 544 aa19.56■□□□□ 0.72
LTBP4-209ENST00000594116 RGS22Q8NE09 1264 aa19.56■□□□□ 0.72
LTBP4-209ENST00000594116 PHKBQ93100 1093 aa19.56■□□□□ 0.72
LTBP4-209ENST00000594116 INTS4Q96HW7 963 aaKnown RBP19.56■□□□□ 0.72
LTBP4-209ENST00000594116 PPP1R12CQ9BZL4 782 aa19.56■□□□□ 0.72
LTBP4-209ENST00000594116 CDC37Q16543 378 aaPredicted RBP19.55■□□□□ 0.72
LTBP4-209ENST00000594116 TMEM240Q5SV17 173 aa19.55■□□□□ 0.72
LTBP4-209ENST00000594116 RASIP1Q5U651 963 aa19.55■□□□□ 0.72
LTBP4-209ENST00000594116 PSRC1Q6PGN9 363 aaPredicted RBP19.55■□□□□ 0.72
LTBP4-209ENST00000594116 C16orf59Q7L2K0 433 aa19.55■□□□□ 0.72
LTBP4-209ENST00000594116 RRP36Q96EU6 259 aaKnown RBP19.55■□□□□ 0.72
LTBP4-209ENST00000594116 PIGSQ96S52 555 aa19.55■□□□□ 0.72
LTBP4-209ENST00000594116 SCN10AQ9Y5Y9 1956 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 B4DLN1 442 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 ZBTB5O15062 677 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 NKRFO15226 690 aaKnown RBP eCLIP19.54■□□□□ 0.72
LTBP4-209ENST00000594116 JAK2O60674 1132 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 DNAJB2P25686 324 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 CPT1AP50416 773 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 MRPL12P52815 198 aaKnown RBP19.54■□□□□ 0.72
LTBP4-209ENST00000594116 PDE4DQ08499 809 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 SSRP1Q08945 709 aaKnown RBP19.54■□□□□ 0.72
LTBP4-209ENST00000594116 QRICH1Q2TAL8 776 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 USH1GQ495M9 461 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 TRIM22Q8IYM9 498 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 SLC26A6Q9BXS9 759 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 HIPK3Q9H422 1215 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 VAT1LQ9HCJ6 419 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 POLR3EQ9NVU0 708 aa19.54■□□□□ 0.72
LTBP4-209ENST00000594116 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.54■□□□□ 0.72
LTBP4-209ENST00000594116 ABCB11O95342 1321 aa19.53■□□□□ 0.72
LTBP4-209ENST00000594116 PRUNE2Q8WUY3 3088 aa19.53■□□□□ 0.72
LTBP4-209ENST00000594116 PNMA6FA0A0J9YX94 578 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms