RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 IL17RBQ9NRM6 502 aa10.03□□□□□ -0.8
SMG9-202ENST00000594081 GTF2IRD1Q9UHL9 959 aa10.03□□□□□ -0.8
SMG9-202ENST00000594081 CTNNA3Q9UI47 895 aa10.03□□□□□ -0.8
SMG9-202ENST00000594081 FAM50BQ9Y247 325 aa10.03□□□□□ -0.8
SMG9-202ENST00000594081 INSL6Q9Y581 213 aa10.03□□□□□ -0.8
SMG9-202ENST00000594081 C19orf67A6NJJ6 358 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 PATL2C9JE40 543 aaKnown RBP10.02□□□□□ -0.81
SMG9-202ENST00000594081 ZFYP08048 801 aaPredicted RBP10.02□□□□□ -0.81
SMG9-202ENST00000594081 IRS1P35568 1242 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 RPS6P62753 249 aaKnown RBP10.02□□□□□ -0.81
SMG9-202ENST00000594081 MKRN4PQ13434 485 aaPredicted RBP10.02□□□□□ -0.81
SMG9-202ENST00000594081 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 COL19A1Q14993 1142 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 EPC2Q52LR7 807 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 TCEAL5Q5H9L2 206 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 SYDE2Q5VT97 1194 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 TRAF7Q6Q0C0 670 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMG9-202ENST00000594081 MYOCDQ8IZQ8 938 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 BANK1Q8NDB2 785 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 DNERQ8NFT8 737 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 DCAF4Q8WV16 495 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 KAT2BQ92831 832 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 WNT8BQ93098 351 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 MFSD14AQ96MC6 490 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 LRRCC1Q9C099 1032 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 NAPBQ9H115 298 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 ECHDC1Q9NTX5 307 aa10.02□□□□□ -0.81
SMG9-202ENST00000594081 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMG9-202ENST00000594081 FRMPD2Q68DX3 1309 aaPredicted RBP10.02□□□□□ -0.81
SMG9-202ENST00000594081 TECTAO75443 2155 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 SMARCA5O60264 1052 aaPredicted RBP10.01□□□□□ -0.81
SMG9-202ENST00000594081 LGR5O75473 907 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 GH1P01241 217 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 AMHP03971 560 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 HTRA4P83105 476 aaPredicted RBP10.01□□□□□ -0.81
SMG9-202ENST00000594081 ARHGAP1Q07960 439 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 PTK7Q13308 1070 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 TRIM71Q2Q1W2 868 aaKnown RBP10.01□□□□□ -0.81
SMG9-202ENST00000594081 ZNF618Q5T7W0 954 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 TSHZ3Q63HK5 1081 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 BTNL9Q6UXG8 535 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 C7orf31Q8N865 590 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 PRSS33Q8NF86 280 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 SAMD11Q96NU1 681 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 UPF3BQ9BZI7 483 aaKnown RBP10.01□□□□□ -0.81
SMG9-202ENST00000594081 NSUN3Q9H649 340 aaKnown RBP10.01□□□□□ -0.81
SMG9-202ENST00000594081 CLDND1Q9NY35 253 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 HDAC6Q9UBN7 1215 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 MUTYHQ9UIF7 546 aa10.01□□□□□ -0.81
SMG9-202ENST00000594081 B4DLN1 442 aa10□□□□□ -0.81
SMG9-202ENST00000594081 H3BNC9 293 aa10□□□□□ -0.81
SMG9-202ENST00000594081 CCER2I3L3R5 266 aa10□□□□□ -0.81
SMG9-202ENST00000594081 F2P00734 622 aa10□□□□□ -0.81
SMG9-202ENST00000594081 ZNF286BP0CG31 522 aa10□□□□□ -0.81
SMG9-202ENST00000594081 CASTP20810 708 aaKnown RBP10□□□□□ -0.81
SMG9-202ENST00000594081 NOVP48745 357 aa10□□□□□ -0.81
SMG9-202ENST00000594081 MRPL12P52815 198 aaKnown RBP10□□□□□ -0.81
SMG9-202ENST00000594081 GPM6BQ13491 265 aa10□□□□□ -0.81
SMG9-202ENST00000594081 DGKDQ16760 1214 aa10□□□□□ -0.81
SMG9-202ENST00000594081 LY6KQ17RY6 165 aa10□□□□□ -0.81
SMG9-202ENST00000594081 HERC4Q5GLZ8 1057 aaPredicted RBP10□□□□□ -0.81
SMG9-202ENST00000594081 CCDC62Q6P9F0 684 aa10□□□□□ -0.81
SMG9-202ENST00000594081 CHST3Q7LGC8 479 aa10□□□□□ -0.81
SMG9-202ENST00000594081 RPAINQ86UA6 219 aa10□□□□□ -0.81
SMG9-202ENST00000594081 FBXO11Q86XK2 927 aa10□□□□□ -0.81
SMG9-202ENST00000594081 YME1L1Q96TA2 773 aa10□□□□□ -0.81
SMG9-202ENST00000594081 SEC62Q99442 399 aaKnown RBP10□□□□□ -0.81
SMG9-202ENST00000594081 POP1Q99575 1024 aaKnown RBP10□□□□□ -0.81
SMG9-202ENST00000594081 ALG1Q9BT22 464 aa10□□□□□ -0.81
SMG9-202ENST00000594081 KATNAL1Q9BW62 490 aa10□□□□□ -0.81
SMG9-202ENST00000594081 GPCPD1Q9NPB8 672 aa10□□□□□ -0.81
SMG9-202ENST00000594081 ZBTB40Q9NUA8 1239 aa10□□□□□ -0.81
SMG9-202ENST00000594081 DDX19BQ9UMR2 479 aa10□□□□□ -0.81
SMG9-202ENST00000594081 EMSYQ7Z589 1322 aa10□□□□□ -0.81
SMG9-202ENST00000594081 WDR19Q8NEZ3 1342 aa10□□□□□ -0.81
SMG9-202ENST00000594081 ST18O60284 1047 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 PSEN2P49810 448 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 PTPN5P54829 565 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 CTDSPL2Q05D32 466 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 MFSD10Q14728 455 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 SMAD2Q15796 467 aaKnown RBP9.99□□□□□ -0.81
SMG9-202ENST00000594081 CLUL1Q15846 466 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 KIAA0753Q2KHM9 967 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 SEPT14Q6ZU15 432 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 DBF4BQ8NFT6 615 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 GPATCH3Q96I76 525 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 INCENPQ9NQS7 918 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 PNMA2Q9UL42 364 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 USP34Q70CQ2 3546 aa9.99□□□□□ -0.81
SMG9-202ENST00000594081 HAS3O00219 553 aa9.98□□□□□ -0.81
SMG9-202ENST00000594081 FOXP2O15409 715 aa9.98□□□□□ -0.81
SMG9-202ENST00000594081 MBTPS2O43462 519 aa9.98□□□□□ -0.81
SMG9-202ENST00000594081 RANBP6O60518 1105 aaKnown RBP9.98□□□□□ -0.81
SMG9-202ENST00000594081 PDHBP11177 359 aa9.98□□□□□ -0.81
SMG9-202ENST00000594081 LTBRP36941 435 aa9.98□□□□□ -0.81
SMG9-202ENST00000594081 ZNF200P98182 395 aaPredicted RBP9.98□□□□□ -0.81
SMG9-202ENST00000594081 USH1GQ495M9 461 aa9.98□□□□□ -0.81
SMG9-202ENST00000594081 RNF135Q8IUD6 432 aa9.98□□□□□ -0.81
SMG9-202ENST00000594081 TMEM192Q8IY95 271 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms