RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 PIGSQ96S52 555 aa20.83■□□□□ 0.93
CIRBP-243ENST00000593128 FTOQ9C0B1 505 aaKnown RBP eCLIP20.83■□□□□ 0.938e-7■□□□□ 9.3
CIRBP-243ENST00000593128 SLC28A3Q9HAS3 691 aa20.83■□□□□ 0.93
CIRBP-243ENST00000593128 PRUNE2Q8WUY3 3088 aa20.82■□□□□ 0.92
CIRBP-243ENST00000593128 PALM3A6NDB9 673 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-243ENST00000593128 EIF3JO75822 258 aaKnown RBP20.82■□□□□ 0.92
CIRBP-243ENST00000593128 IGFBP4P22692 258 aa20.82■□□□□ 0.92
CIRBP-243ENST00000593128 GRM4Q14833 912 aa20.82■□□□□ 0.92
CIRBP-243ENST00000593128 PTGISQ16647 500 aa20.82■□□□□ 0.92
CIRBP-243ENST00000593128 TMEM67Q5HYA8 995 aa20.82■□□□□ 0.92
CIRBP-243ENST00000593128 FCHSD1Q86WN1 690 aa20.82■□□□□ 0.92
CIRBP-243ENST00000593128 ZFP91Q96JP5 570 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-243ENST00000593128 ALG1Q9BT22 464 aa20.82■□□□□ 0.92
CIRBP-243ENST00000593128 MAF1Q9H063 256 aa20.82■□□□□ 0.92
CIRBP-243ENST00000593128 YBX2Q9Y2T7 364 aaKnown RBP20.82■□□□□ 0.92
CIRBP-243ENST00000593128 OPLAHO14841 1288 aa20.81■□□□□ 0.92
CIRBP-243ENST00000593128 SGSM2O43147 1006 aa20.81■□□□□ 0.92
CIRBP-243ENST00000593128 MYOGP15173 224 aa20.81■□□□□ 0.92
CIRBP-243ENST00000593128 ATP2A2P16615 1042 aaKnown RBP20.81■□□□□ 0.92
CIRBP-243ENST00000593128 CASTP20810 708 aaKnown RBP20.81■□□□□ 0.92
CIRBP-243ENST00000593128 HSD17B4P51659 736 aa20.81■□□□□ 0.92
CIRBP-243ENST00000593128 BFSP2Q13515 415 aa20.81■□□□□ 0.92
CIRBP-243ENST00000593128 CATIPQ7Z7H3 387 aa20.81■□□□□ 0.92
CIRBP-243ENST00000593128 DHX37Q8IY37 1157 aaKnown RBP20.81■□□□□ 0.92
CIRBP-243ENST00000593128 USP38Q8NB14 1042 aa20.81■□□□□ 0.92
CIRBP-243ENST00000593128 DDX41Q9UJV9 622 aaKnown RBP20.81■□□□□ 0.92
CIRBP-243ENST00000593128 TANC1Q9C0D5 1861 aa20.81■□□□□ 0.92
CIRBP-243ENST00000593128 PFKMP08237 780 aa20.8■□□□□ 0.92
CIRBP-243ENST00000593128 ZNF286BP0CG31 522 aa20.8■□□□□ 0.92
CIRBP-243ENST00000593128 ACTN1P12814 892 aa20.8■□□□□ 0.92
CIRBP-243ENST00000593128 PTPN11Q06124 597 aaPredicted RBP20.8■□□□□ 0.92
CIRBP-243ENST00000593128 DGKDQ16760 1214 aa20.8■□□□□ 0.92
CIRBP-243ENST00000593128 PPP2R2DQ66LE6 453 aa20.8■□□□□ 0.92
CIRBP-243ENST00000593128 STOX1Q6ZVD7 989 aa20.8■□□□□ 0.92
CIRBP-243ENST00000593128 BAZ2BQ9UIF8 2168 aaKnown RBP20.8■□□□□ 0.92
CIRBP-243ENST00000593128 GCOM1H8Y6P7 765 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-243ENST00000593128 IQCF3P0C7M6 154 aa20.79■□□□□ 0.92
CIRBP-243ENST00000593128 POLR2MP0CAP2 368 aa20.79■□□□□ 0.92
CIRBP-243ENST00000593128 CCDC85BQ15834 202 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-243ENST00000593128 GDF6Q6KF10 455 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-243ENST00000593128 C7orf31Q8N865 590 aa20.79■□□□□ 0.92
CIRBP-243ENST00000593128 MTMR8Q96EF0 704 aa20.79■□□□□ 0.92
CIRBP-243ENST00000593128 PDCD2LQ9BRP1 358 aa20.79■□□□□ 0.92
CIRBP-243ENST00000593128 RBM8AQ9Y5S9 174 aaKnown RBP20.79■□□□□ 0.92
CIRBP-243ENST00000593128 TRIP12Q14669 1992 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-243ENST00000593128 RFC2P35250 354 aa20.78■□□□□ 0.92
CIRBP-243ENST00000593128 TRAF1Q13077 416 aa20.78■□□□□ 0.92
CIRBP-243ENST00000593128 LAMC2Q13753 1193 aa20.78■□□□□ 0.92
CIRBP-243ENST00000593128 PGM5Q15124 567 aa20.78■□□□□ 0.92
CIRBP-243ENST00000593128 SLC35G1Q2M3R5 365 aa20.78■□□□□ 0.92
CIRBP-243ENST00000593128 CCDC155Q8N6L0 562 aa20.78■□□□□ 0.92
CIRBP-243ENST00000593128 IL31RAQ8NI17 732 aa20.78■□□□□ 0.92
CIRBP-243ENST00000593128 KAT2BQ92831 832 aa20.78■□□□□ 0.92
CIRBP-243ENST00000593128 VWCEQ96DN2 955 aa20.78■□□□□ 0.92
CIRBP-243ENST00000593128 MYL10Q9BUA6 226 aa20.78■□□□□ 0.92
CIRBP-243ENST00000593128 PITPNM1O00562 1244 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 CYTH3O43739 400 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 CCND2P30279 289 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 PSEN2P49810 448 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 MFSD10Q14728 455 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 CASC1Q6TDU7 716 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 NFXL1Q6ZNB6 911 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 MICALL1Q8N3F8 863 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 SPATA33Q96N06 139 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 RIOX1Q9H6W3 641 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 PRDM6Q9NQX0 595 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 HDAC6Q9UBN7 1215 aa20.77■□□□□ 0.92
CIRBP-243ENST00000593128 PNMA6FA0A0J9YX94 578 aa20.76■□□□□ 0.91
CIRBP-243ENST00000593128 GGPS1O95749 300 aa20.76■□□□□ 0.91
CIRBP-243ENST00000593128 ANTXR2P58335 489 aa20.76■□□□□ 0.91
CIRBP-243ENST00000593128 TROAPQ12815 778 aa20.76■□□□□ 0.91
CIRBP-243ENST00000593128 KIAA0753Q2KHM9 967 aa20.76■□□□□ 0.91
CIRBP-243ENST00000593128 PPTC7Q8NI37 304 aa20.76■□□□□ 0.91
CIRBP-243ENST00000593128 CTCFLQ8NI51 663 aaPredicted RBP20.76■□□□□ 0.91
CIRBP-243ENST00000593128 KATNAL1Q9BW62 490 aa20.76■□□□□ 0.91
CIRBP-243ENST00000593128 MAP3K20Q9NYL2 800 aaKnown RBP20.76■□□□□ 0.91
CIRBP-243ENST00000593128 PCDHA11Q9Y5I1 949 aa20.76■□□□□ 0.91
CIRBP-243ENST00000593128 ADGRE1Q14246 886 aa20.75■□□□□ 0.91
CIRBP-243ENST00000593128 MB21D2Q8IYB1 491 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-243ENST00000593128 MAP4K1Q92918 833 aa20.75■□□□□ 0.91
CIRBP-243ENST00000593128 CERS4Q9HA82 394 aa20.75■□□□□ 0.91
CIRBP-243ENST00000593128 MLXIPQ9HAP2 919 aa20.75■□□□□ 0.91
CIRBP-243ENST00000593128 MYO9BQ13459 2157 aa20.75■□□□□ 0.91
CIRBP-243ENST00000593128 PRC1O43663 620 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 RGS20O76081 388 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 CA3P07451 260 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 KCNJ6P48051 423 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 KCNV1Q6PIU1 500 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 LRRC8DQ7L1W4 858 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 VSIG10LQ86VR7 867 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 ZNF654Q8IZM8 581 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 CAGE1Q8TC20 777 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 IGDCC4Q8TDY8 1250 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 AFAP1L1Q8TED9 768 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 GPKOWQ92917 476 aaPredicted RBP eCLIP20.74■□□□□ 0.91
CIRBP-243ENST00000593128 EMID1Q96A84 441 aaPredicted RBP20.74■□□□□ 0.91
CIRBP-243ENST00000593128 GTF2IRD1Q9UHL9 959 aa20.74■□□□□ 0.91
CIRBP-243ENST00000593128 CCDC69A6NI79 296 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 SELPP16109 830 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 UBA1P22314 1058 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms