RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 COL11A1P12107 1806 aaPredicted RBP13.63□□□□□ -0.23
DDX39A-219ENST00000592927 H3BQV1 296 aa13.63□□□□□ -0.23
DDX39A-219ENST00000592927 MSCO60682 206 aa13.63□□□□□ -0.23
DDX39A-219ENST00000592927 SCG2P13521 617 aa13.63□□□□□ -0.23
DDX39A-219ENST00000592927 FDPSP14324 419 aaKnown RBP13.63□□□□□ -0.23
DDX39A-219ENST00000592927 PTMSP20962 102 aa13.63□□□□□ -0.23
DDX39A-219ENST00000592927 MRE11P49959 708 aa13.63□□□□□ -0.23
DDX39A-219ENST00000592927 ADGRE1Q14246 886 aa13.63□□□□□ -0.23
DDX39A-219ENST00000592927 PFKFB3Q16875 520 aaPredicted RBP13.63□□□□□ -0.23
DDX39A-219ENST00000592927 MFSD14CQ5VZR4 134 aa13.63□□□□□ -0.23
DDX39A-219ENST00000592927 MCF2L2Q86YR7 1114 aa13.63□□□□□ -0.23
DDX39A-219ENST00000592927 CLEC4DQ8WXI8 215 aa13.63□□□□□ -0.23
DDX39A-219ENST00000592927 APBA2Q99767 749 aa13.63□□□□□ -0.23
DDX39A-219ENST00000592927 MYH15Q9Y2K3 1946 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 VPS37CA5D8V6 355 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-219ENST00000592927 hCG_1984214I3L0E3 225 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 NFIBO00712 420 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 DEXIO95424 95 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 F13A1P00488 732 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 ADORA2AP29274 412 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 GRB14Q14449 540 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 SNX17Q15036 470 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 WWC2Q6AWC2 1192 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 NSMFQ6X4W1 530 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX39A-219ENST00000592927 DPP9Q86TI2 863 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 ZNF713Q8N859 430 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-219ENST00000592927 ARRDC4Q8NCT1 418 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 GPKOWQ92917 476 aaPredicted RBP eCLIP13.62□□□□□ -0.23
DDX39A-219ENST00000592927 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-219ENST00000592927 ZSCAN16Q9H4T2 348 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-219ENST00000592927 SLC5A4Q9NY91 659 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 FLRT1Q9NZU1 646 aa13.62□□□□□ -0.23
DDX39A-219ENST00000592927 CXXC1Q9P0U4 656 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-219ENST00000592927 TCHHQ07283 1943 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 KBTBD13C9JR72 458 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 GOLGA6L22H0YM25 854 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 PBX2P40425 430 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 NAPAP54920 295 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 TFF2Q03403 129 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 TLE2Q04725 743 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 MAP2K5Q13163 448 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 NFKBIBQ15653 356 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 PKN1Q16512 942 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 RNF207Q6ZRF8 634 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 C8orf76Q96K31 380 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 ALG1Q9BT22 464 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 MAF1Q9H063 256 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 A1CFQ9NQ94 594 aaKnown RBP13.61□□□□□ -0.23
DDX39A-219ENST00000592927 BARHL2Q9NY43 387 aa13.61□□□□□ -0.23
DDX39A-219ENST00000592927 FAM86C2PA6NEL3 165 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 DDX11L8A8MPP1 907 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 STXBP3O00186 592 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 GPR37L1O60883 481 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 DTNBO60941 627 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 BAG4O95429 457 aaKnown RBP13.6□□□□□ -0.23
DDX39A-219ENST00000592927 CFBP00751 764 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-219ENST00000592927 PGK2P07205 417 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 XBP1P17861 261 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 CALML3P27482 149 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 MCM4P33991 863 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 ADCYAP1R1P41586 468 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 KCNQ1P51787 676 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 FPGSQ05932 587 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 BAATQ14032 418 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-219ENST00000592927 TRIM29Q14134 588 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 PPP1R18Q6NYC8 613 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 SAMD3Q8N6K7 520 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 FBXO18Q8NFZ0 1043 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-219ENST00000592927 FERMT2Q96AC1 680 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 PBX4Q9BYU1 374 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 PSTPIP2Q9H939 334 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 C11orf16Q9NQ32 467 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 CYP39A1Q9NYL5 469 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 PIEZO1Q92508 2521 aa13.6□□□□□ -0.23
DDX39A-219ENST00000592927 BAZ2BQ9UIF8 2168 aaKnown RBP13.59□□□□□ -0.23
DDX39A-219ENST00000592927 GRXCR1A8MXD5 290 aa13.59□□□□□ -0.23
DDX39A-219ENST00000592927 GCOM1H8Y6P7 765 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-219ENST00000592927 COBLO75128 1261 aa13.59□□□□□ -0.23
DDX39A-219ENST00000592927 POLR2MP0CAP2 368 aa13.59□□□□□ -0.23
DDX39A-219ENST00000592927 RAG1P15918 1043 aa13.59□□□□□ -0.23
DDX39A-219ENST00000592927 CYP2C19P33261 490 aa13.59□□□□□ -0.23
DDX39A-219ENST00000592927 RPS6P62753 249 aaKnown RBP13.59□□□□□ -0.23
DDX39A-219ENST00000592927 ANO1Q5XXA6 986 aa13.59□□□□□ -0.23
DDX39A-219ENST00000592927 FAM177A1Q8N128 213 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-219ENST00000592927 TRPV1Q8NER1 839 aa13.59□□□□□ -0.23
DDX39A-219ENST00000592927 TBC1D5Q92609 795 aa13.59□□□□□ -0.23
DDX39A-219ENST00000592927 CUL5Q93034 780 aa13.59□□□□□ -0.23
DDX39A-219ENST00000592927 SH3GLB2Q9NR46 395 aa13.59□□□□□ -0.23
DDX39A-219ENST00000592927 MAP3K20Q9NYL2 800 aaKnown RBP13.59□□□□□ -0.23
DDX39A-219ENST00000592927 DNAJC25-GNG10A0A024R161 153 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 SMCO2A6NFE2 343 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 OPLAHO14841 1288 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 CLTBP09497 229 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 HOXC6P09630 235 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 ADCY7P51828 1080 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 MRPL12P52815 198 aaKnown RBP13.58□□□□□ -0.24
DDX39A-219ENST00000592927 AAK1Q2M2I8 961 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms