RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 GCOM1H8Y6P7 765 aaPredicted RBP17.2■□□□□ 0.34
SF3A2-207ENST00000592839 B4GALT4O60513 344 aa17.2■□□□□ 0.34
SF3A2-207ENST00000592839 POLR2MP0CAP2 368 aa17.2■□□□□ 0.34
SF3A2-207ENST00000592839 ICAM3P32942 547 aa17.2■□□□□ 0.34
SF3A2-207ENST00000592839 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
SF3A2-207ENST00000592839 HOMER1Q86YM7 354 aa17.2■□□□□ 0.34
SF3A2-207ENST00000592839 CCDC136Q96JN2 1154 aa17.2■□□□□ 0.34
SF3A2-207ENST00000592839 INPP4AQ96PE3 977 aaPredicted RBP17.2■□□□□ 0.34
SF3A2-207ENST00000592839 NEK1Q96PY6 1258 aa17.2■□□□□ 0.34
SF3A2-207ENST00000592839 NOC4LQ9BVI4 516 aaKnown RBP17.2■□□□□ 0.34
SF3A2-207ENST00000592839 CCDC69A6NI79 296 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 MMP3P08254 477 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
SF3A2-207ENST00000592839 SUPT20HL2P0C7V6 817 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 EIF2AK2P19525 551 aaKnown RBP17.19■□□□□ 0.34
SF3A2-207ENST00000592839 RBL2Q08999 1139 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 PPIGQ13427 754 aaKnown RBP eCLIP17.19■□□□□ 0.342e-9■■□□□ 12.2
SF3A2-207ENST00000592839 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 XRRA1Q6P2D8 792 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 APOA5Q6Q788 366 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 DHX32Q7L7V1 743 aaKnown RBP17.19■□□□□ 0.34
SF3A2-207ENST00000592839 RASEFQ8IZ41 740 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 TMEM199Q8N511 208 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
SF3A2-207ENST00000592839 PPTC7Q8NI37 304 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 COPS5Q92905 334 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
SF3A2-207ENST00000592839 AGXT2Q9BYV1 514 aa17.19■□□□□ 0.34
SF3A2-207ENST00000592839 MYH7BA7E2Y1 1941 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 HAS3O00219 553 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 MEIS2O14770 477 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 F2P00734 622 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 HSPA4P34932 840 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 FUT2Q10981 343 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 LAMC2Q13753 1193 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 PSRC1Q6PGN9 363 aaPredicted RBP17.18■□□□□ 0.34
SF3A2-207ENST00000592839 C16orf59Q7L2K0 433 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 FANCBQ8NB91 859 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 VWCEQ96DN2 955 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 SLC12A7Q9Y666 1083 aa17.18■□□□□ 0.34
SF3A2-207ENST00000592839 PLEKHA8P1O95397 391 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 PFKMP08237 780 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 PSMC6P62333 389 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 TMEM240Q5SV17 173 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 MYSM1Q5VVJ2 828 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 IL31RAQ8NI17 732 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 KAT2BQ92831 832 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 VTI1AQ96AJ9 217 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 MYL10Q9BUA6 226 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 WNT8AQ9H1J5 351 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 HIPK3Q9H422 1215 aa17.17■□□□□ 0.34
SF3A2-207ENST00000592839 RBM28Q9NW13 759 aaKnown RBP17.17■□□□□ 0.34
SF3A2-207ENST00000592839 hCG_1984214I3L0E3 225 aa17.16■□□□□ 0.34
SF3A2-207ENST00000592839 CCND2P30279 289 aa17.16■□□□□ 0.34
SF3A2-207ENST00000592839 HOXA13P31271 388 aaPredicted RBP17.16■□□□□ 0.34
SF3A2-207ENST00000592839 MRPS9P82933 396 aaKnown RBP17.16■□□□□ 0.34
SF3A2-207ENST00000592839 LY6KQ17RY6 165 aa17.16■□□□□ 0.34
SF3A2-207ENST00000592839 ADCK5Q3MIX3 580 aa17.16■□□□□ 0.34
SF3A2-207ENST00000592839 SEPT14Q6ZU15 432 aa17.16■□□□□ 0.34
SF3A2-207ENST00000592839 ZNF713Q8N859 430 aaPredicted RBP17.16■□□□□ 0.34
SF3A2-207ENST00000592839 AFG1LQ8WV93 481 aa17.16■□□□□ 0.34
SF3A2-207ENST00000592839 CTAGE1Q96RT6 745 aa17.16■□□□□ 0.34
SF3A2-207ENST00000592839 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.16■□□□□ 0.342e-11■■□□□ 12
SF3A2-207ENST00000592839 IL23AQ9NPF7 189 aa17.16■□□□□ 0.34
SF3A2-207ENST00000592839 SEC63Q9UGP8 760 aaKnown RBP17.16■□□□□ 0.34
SF3A2-207ENST00000592839 MRVI1Q9Y6F6 885 aa17.16■□□□□ 0.34
SF3A2-207ENST00000592839 CNTNAP5Q8WYK1 1306 aa17.16■□□□□ 0.34
SF3A2-207ENST00000592839 PPFIA4O75335 1185 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 CSF2RAP15509 400 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 CASTP20810 708 aaKnown RBP17.15■□□□□ 0.34
SF3A2-207ENST00000592839 UBA1P22314 1058 aaKnown RBP17.15■□□□□ 0.34
SF3A2-207ENST00000592839 HOXC8P31273 242 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 DGKDQ16760 1214 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 NBPF20Q3BBV1 942 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 CELF3Q5SZQ8 465 aaKnown RBP17.15■□□□□ 0.34
SF3A2-207ENST00000592839 PCNX4Q63HM2 1172 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 PPP1R18Q6NYC8 613 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 HERVK_113Q902F9 699 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 RNPC3Q96LT9 517 aaKnown RBP17.15■□□□□ 0.34
SF3A2-207ENST00000592839 SENP7Q9BQF6 1050 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 TRPV6Q9H1D0 765 aa17.15■□□□□ 0.34
SF3A2-207ENST00000592839 CHD9Q3L8U1 2897 aa17.14■□□□□ 0.33
SF3A2-207ENST00000592839 MYL3P08590 195 aa17.14■□□□□ 0.33
SF3A2-207ENST00000592839 RFC2P35250 354 aa17.14■□□□□ 0.33
SF3A2-207ENST00000592839 EVCP57679 992 aa17.14■□□□□ 0.33
SF3A2-207ENST00000592839 GNPTABQ3T906 1256 aa17.14■□□□□ 0.33
SF3A2-207ENST00000592839 KATNAL1Q9BW62 490 aa17.14■□□□□ 0.33
SF3A2-207ENST00000592839 UMODL1Q5DID0 1318 aa17.14■□□□□ 0.33
SF3A2-207ENST00000592839 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.13■□□□□ 0.33
SF3A2-207ENST00000592839 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.13■□□□□ 0.33
SF3A2-207ENST00000592839 SPATA31C2B4DYI2 1134 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 FIBPO43427 364 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 REC8O95072 547 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 CYP2C18P33260 490 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 SEMA3FQ13275 785 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 ZNF697Q5TEC3 545 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 MICU3Q86XE3 530 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 FAM161BQ96MY7 647 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms