RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 HLA-DQA1Q5Y7H0 255 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 ZDHHC13Q8IUH4 622 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 NXPE1Q8N323 547 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 CHST14Q8NCH0 376 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 ASB11Q8WXH4 323 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 IPPKQ9H8X2 491 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 ATP13A1Q9HD20 1204 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 ZC3H7BQ9UGR2 993 aaKnown RBP8.51□□□□□ -1.05
VMP1-215ENST00000592619 ADGRE2Q9UHX3 823 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 ZKSCAN5Q9Y2L8 839 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 CCDC66A2RUB6 948 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 NPHS1O60500 1241 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 RPL10P27635 214 aaKnown RBP8.5□□□□□ -1.05
VMP1-215ENST00000592619 ADCYAP1R1P41586 468 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 LSSP48449 732 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 ARHGAP44Q17R89 818 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 ZPBP2Q6X784 338 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 WAPLQ7Z5K2 1190 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 FMNL3Q8IVF7 1028 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 HRASLS5Q96KN8 279 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 TCEAL9Q9UHQ7 104 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 FAN1Q9Y2M0 1017 aa8.5□□□□□ -1.05
VMP1-215ENST00000592619 PRR19A6NJB7 356 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 H7BY64 318 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 FKBP9O95302 570 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 PYGMP11217 842 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 BCL6P41182 706 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 ID4P47928 161 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 CEBPAP49715 358 aaPredicted RBP8.49□□□□□ -1.05
VMP1-215ENST00000592619 ST5P78524 1137 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 LACTBP83111 547 aaPredicted RBP8.49□□□□□ -1.05
VMP1-215ENST00000592619 TMPRSS15P98073 1019 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 OCRLQ01968 901 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 NFE2Q16621 373 aaPredicted RBP8.49□□□□□ -1.05
VMP1-215ENST00000592619 FKBP9P1Q75LS8 142 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 OTOP1Q7RTM1 612 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 Q8N1Y9 231 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 DPF3Q92784 378 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 CRTAC1Q9NQ79 661 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 TNFRSF10DQ9UBN6 386 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 VAV3Q9UKW4 847 aa8.49□□□□□ -1.05
VMP1-215ENST00000592619 BAZ1AQ9NRL2 1556 aaPredicted RBP8.48□□□□□ -1.05
VMP1-215ENST00000592619 DNM2P50570 870 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 IL2P60568 153 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 PRKCQQ04759 706 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 MCL1Q07820 350 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 ITKQ08881 620 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 FAPQ12884 760 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 NKAPLQ5M9Q1 402 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 NLGN2Q8NFZ4 835 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 TRIM8Q9BZR9 551 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 PPARGC1AQ9UBK2 798 aaKnown RBP8.48□□□□□ -1.05
VMP1-215ENST00000592619 FBXL7Q9UJT9 491 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 SPEF1Q9Y4P9 236 aa8.48□□□□□ -1.05
VMP1-215ENST00000592619 SMARCA4P51532 1647 aa8.47□□□□□ -1.05
VMP1-215ENST00000592619 K7ESF4 209 aa8.47□□□□□ -1.05
VMP1-215ENST00000592619 ATP2A2P16615 1042 aaKnown RBP8.47□□□□□ -1.05
VMP1-215ENST00000592619 CRY1Q16526 586 aa8.47□□□□□ -1.05
VMP1-215ENST00000592619 MISP3Q96FF7 219 aa8.47□□□□□ -1.05
VMP1-215ENST00000592619 CHAMP1Q96JM3 812 aa8.47□□□□□ -1.05
VMP1-215ENST00000592619 MENTQ9BUN1 341 aa8.47□□□□□ -1.05
VMP1-215ENST00000592619 CLDND1Q9NY35 253 aa8.47□□□□□ -1.05
VMP1-215ENST00000592619 CBLCQ9ULV8 474 aa8.47□□□□□ -1.05
VMP1-215ENST00000592619 PTPDC1A2A3K4 754 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 FADS2P1A8MWK0 482 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 YBX3P16989 372 aaKnown RBP eCLIP8.46□□□□□ -1.06
VMP1-215ENST00000592619 NEK2P51955 445 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 AOC3Q16853 763 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 SYDE2Q5VT97 1194 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 NLRP10Q86W26 655 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 RAVER1Q8IY67 606 aaKnown RBP8.46□□□□□ -1.06
VMP1-215ENST00000592619 CNTD1Q8N815 330 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 C2orf69Q8N8R5 385 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 LINC01599Q8WXQ3 324 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 MTMR8Q96EF0 704 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 TMEM169Q96HH4 297 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 SCYL1Q96KG9 808 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 G6PC3Q9BUM1 346 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 EMC7Q9NPA0 242 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 CATSPERZQ9NTU4 200 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 GEMIN8Q9NWZ8 242 aaKnown RBP8.46□□□□□ -1.06
VMP1-215ENST00000592619 LMCD1Q9NZU5 365 aa8.46□□□□□ -1.06
VMP1-215ENST00000592619 A0A1W2PQ45 241 aaPredicted RBP8.45□□□□□ -1.06
VMP1-215ENST00000592619 A0A1W2PQY0 241 aa8.45□□□□□ -1.06
VMP1-215ENST00000592619 WTIPA6NIX2 430 aaPredicted RBP8.45□□□□□ -1.06
VMP1-215ENST00000592619 ULK1O75385 1050 aa8.45□□□□□ -1.06
VMP1-215ENST00000592619 KPNA1P52294 538 aaPredicted RBP8.45□□□□□ -1.06
VMP1-215ENST00000592619 DOC2BQ14184 412 aa8.45□□□□□ -1.06
VMP1-215ENST00000592619 ATP13A4Q4VNC1 1196 aa8.45□□□□□ -1.06
VMP1-215ENST00000592619 HABP4Q5JVS0 413 aaKnown RBP8.45□□□□□ -1.06
VMP1-215ENST00000592619 CEP68Q76N32 757 aa8.45□□□□□ -1.06
VMP1-215ENST00000592619 C11orf74Q86VG3 221 aa8.45□□□□□ -1.06
VMP1-215ENST00000592619 CHTF18Q8WVB6 975 aa8.45□□□□□ -1.06
VMP1-215ENST00000592619 SYTL4Q96C24 671 aaPredicted RBP8.45□□□□□ -1.06
VMP1-215ENST00000592619 MAP6Q96JE9 813 aa8.45□□□□□ -1.06
VMP1-215ENST00000592619 GPR101Q96P66 508 aaPredicted RBP8.45□□□□□ -1.06
VMP1-215ENST00000592619 CCDC8Q9H0W5 538 aaPredicted RBP8.45□□□□□ -1.06
VMP1-215ENST00000592619 THG1LQ9NWX6 298 aaKnown RBP8.45□□□□□ -1.06
VMP1-215ENST00000592619 X6R8D5 127 aa8.45□□□□□ -1.06
VMP1-215ENST00000592619 CECR2Q9BXF3 1484 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms