RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PRAMEF18Q5VWM3 479 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 GIMAP6Q6P9H5 292 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 DHX32Q7L7V1 743 aaKnown RBP9.36□□□□□ -0.91
VMP1-213ENST00000591877 TMEM102Q8N9M5 508 aaPredicted RBP9.36□□□□□ -0.91
VMP1-213ENST00000591877 NT5C1AQ9BXI3 368 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 SMC4Q9NTJ3 1288 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 DZANK1Q9NVP4 752 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 PCDHAC2Q9Y5I4 1007 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 PAPPA2Q9BXP8 1791 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 SASH1O94885 1247 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 CT47B1P0C2W7 299 aaPredicted RBP9.35□□□□□ -0.91
VMP1-213ENST00000591877 GYG1P46976 350 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 RFX5P48382 616 aaPredicted RBP9.35□□□□□ -0.91
VMP1-213ENST00000591877 UBE4AQ14139 1066 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 PCSK7Q16549 785 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 RGMBQ6NW40 437 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 MOB2Q70IA6 237 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 ZNF804AQ7Z570 1209 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 VGLL2Q8N8G2 317 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 C2orf69Q8N8R5 385 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 PHC3Q8NDX5 983 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 TDRD7Q8NHU6 1098 aaKnown RBP9.35□□□□□ -0.91
VMP1-213ENST00000591877 KLHDC4Q8TBB5 520 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 FAM84BQ96KN1 310 aaPredicted RBP9.35□□□□□ -0.91
VMP1-213ENST00000591877 SPACA7Q96KW9 195 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 NOB1Q9ULX3 412 aaKnown RBP9.35□□□□□ -0.91
VMP1-213ENST00000591877 JAG2Q9Y219 1238 aa9.35□□□□□ -0.91
VMP1-213ENST00000591877 TMA7Q9Y2S6 64 aaKnown RBP9.35□□□□□ -0.91
VMP1-213ENST00000591877 AOX1Q06278 1338 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 FAM205AQ6ZU69 1335 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 CASP8AP2Q9UKL3 1982 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 CPB1P15086 417 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 SOX9P48436 509 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 CD97P48960 835 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 RARSP54136 660 aaKnown RBP9.34□□□□□ -0.91
VMP1-213ENST00000591877 RPS26P62854 115 aaKnown RBP9.34□□□□□ -0.91
VMP1-213ENST00000591877 FKBP1AP62942 108 aaKnown RBP9.34□□□□□ -0.91
VMP1-213ENST00000591877 GPLD1P80108 840 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 GRIK5Q16478 980 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 IGF2-ASQ6U949 168 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 FAM35AQ86V20 835 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 DTWD1Q8N5C7 304 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 SUPT16HQ9Y5B9 1047 aaKnown RBP9.34□□□□□ -0.91
VMP1-213ENST00000591877 OAS3Q9Y6K5 1087 aaKnown RBP9.34□□□□□ -0.91
VMP1-213ENST00000591877 AKAP11Q9UKA4 1901 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 MYH13Q9UKX3 1938 aa9.34□□□□□ -0.91
VMP1-213ENST00000591877 MROH5Q6ZUA9 1318 aa9.33□□□□□ -0.92
VMP1-213ENST00000591877 LIG3P49916 1009 aa9.33□□□□□ -0.92
VMP1-213ENST00000591877 MMP14P50281 582 aa9.33□□□□□ -0.92
VMP1-213ENST00000591877 LMNB2Q03252 620 aa9.33□□□□□ -0.92
VMP1-213ENST00000591877 NOGQ13253 232 aa9.33□□□□□ -0.92
VMP1-213ENST00000591877 CKAP2LQ8IYA6 745 aa9.33□□□□□ -0.92
VMP1-213ENST00000591877 ZNF296Q8WUU4 475 aaPredicted RBP9.33□□□□□ -0.92
VMP1-213ENST00000591877 OSBPL2Q9H1P3 480 aa9.33□□□□□ -0.92
VMP1-213ENST00000591877 HDAC9Q9UKV0 1011 aa9.33□□□□□ -0.92
VMP1-213ENST00000591877 RNF114Q9Y508 228 aa9.33□□□□□ -0.92
VMP1-213ENST00000591877 F8W031 263 aaPredicted RBP9.32□□□□□ -0.92
VMP1-213ENST00000591877 GREM1O60565 184 aa9.32□□□□□ -0.92
VMP1-213ENST00000591877 PDE8BO95263 885 aa9.32□□□□□ -0.92
VMP1-213ENST00000591877 MED26O95402 600 aa9.32□□□□□ -0.92
VMP1-213ENST00000591877 HIBADHP31937 336 aaKnown RBP9.32□□□□□ -0.92
VMP1-213ENST00000591877 GRIA4P48058 902 aa9.32□□□□□ -0.92
VMP1-213ENST00000591877 ZNF157P51786 506 aaPredicted RBP9.32□□□□□ -0.92
VMP1-213ENST00000591877 FKBP1BP68106 108 aa9.32□□□□□ -0.92
VMP1-213ENST00000591877 KIF23Q02241 960 aaPredicted RBP9.32□□□□□ -0.92
VMP1-213ENST00000591877 METTL24Q5JXM2 366 aa9.32□□□□□ -0.92
VMP1-213ENST00000591877 ATG9AQ7Z3C6 839 aa9.32□□□□□ -0.92
VMP1-213ENST00000591877 NXPE3Q969Y0 559 aa9.32□□□□□ -0.92
VMP1-213ENST00000591877 PRMT6Q96LA8 375 aaPredicted RBP9.32□□□□□ -0.92
VMP1-213ENST00000591877 NECAB3Q96P71 396 aaPredicted RBP9.32□□□□□ -0.92
VMP1-213ENST00000591877 TRIM56Q9BRZ2 755 aaKnown RBP9.32□□□□□ -0.92
VMP1-213ENST00000591877 API5Q9BZZ5 524 aaKnown RBP9.32□□□□□ -0.92
VMP1-213ENST00000591877 TNNQ9UQP3 1299 aa9.32□□□□□ -0.92
VMP1-213ENST00000591877 SSC5DA1L4H1 1573 aa9.32□□□□□ -0.92
VMP1-213ENST00000591877 ARID1BQ8NFD5 2236 aaPredicted RBP9.32□□□□□ -0.92
VMP1-213ENST00000591877 MINDY4BA8MYZ0 360 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 UBE2Q2LH0YL09 131 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 ALX3O95076 343 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 NCLP19338 710 aaKnown RBP9.31□□□□□ -0.92
VMP1-213ENST00000591877 FGFR2P21802 821 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 FZD5Q13467 585 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 DLGAP5Q15398 846 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 CFAP100Q494V2 611 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 DIEXFQ68CQ4 756 aaKnown RBP9.31□□□□□ -0.92
VMP1-213ENST00000591877 AGMOQ6ZNB7 445 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 CCDC84Q86UT8 332 aaPredicted RBP9.31□□□□□ -0.92
VMP1-213ENST00000591877 RASAL3Q86YV0 1011 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 WFDC8Q8IUA0 241 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 EAF1Q96JC9 268 aaPredicted RBP9.31□□□□□ -0.92
VMP1-213ENST00000591877 MEIS3Q99687 375 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 LPIN3Q9BQK8 851 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 ZNF576Q9H609 170 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 FZD1Q9UP38 647 aa9.31□□□□□ -0.92
VMP1-213ENST00000591877 LAMB1P07942 1786 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 COL1A1P02452 1464 aaPredicted RBP9.3□□□□□ -0.92
VMP1-213ENST00000591877 A0A096LPE4 126 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 A0A1W2PPZ6 126 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 TLDC2A0PJX2 215 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 CLRN2A0PK11 232 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 EYA2O00167 538 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms